Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag1296 | ATGGAGTTTGGTTTTGACAAAAAAGACCCAACCAGCTTCTGCCTCTTCGCCACTTTTATTGGCTCCAAACCGCAGTTTCTAAACGATAGATATGACCTTTTCCTCTCCCTCCTCCTAGCCTTGACCTCTCTTTTCCTCCTCCCTTGGGCTTTTTCAGTTGGCGGGACGGCATGGAAAAACGGAAGGGGCCGAAAAAACGGCGCCGTTTTAATTCCCGGGCCATGTGGACTACCTATTTTCGGTAGCCTTTTTGCTCTCAGCCGTGGCTTAGCTCACCGAACACTAGCGGCTATGGCATGGAGCCGAGGTAACACTCAGCTCATGGCTTTCAGCCTTGGCTCGACTCCTGTCGTAGTGGCTTCTGACCCTCACACCGCACGTGAGATCCTGACATCGCCACACTTTGCTGATCGCCCAATCAAACAGTCGGCCAAGAGCCTCTTGTTCAGCCGAGCCATCGGCTTTGCGCCTAATGGTACATATTGGCGTCTTCTAAGGCGGATTGCTTCGACTCACCTCTTTTCACCAAAGCGCATTTTAGCCCATGAAACAAGTCGCCGGCTACAATGCGCCGTCATGCTGTACAATATAGCAAAAGAACAAAAACATGAAAAAACCGTTCTTCTAAGAAAACATCTACAAGCAGCTTCGTTAAATAACATGATGGGGAGTGTGTTTGGAAAACGGTTCGACTCGGATCCTGCTAACGAGGAGCTGGAGGAGGTCCAGAGTTTGGTTCGGGAAGGGTTTGAGCTTCTAGGTGCTTTTAACTGGTCAGACTATCTTCCATGGTTGAGCTGCTTCTACGACCCGTTTCGGGTCAATGAGCGGTGCTCCGAAATGGTTCCTCGGGTCAGAAAACTGGTCAAAAGGATTATACAGGAGCACAGAGATCACAATGGGTCCAAAAACGCCGTGTCGGATGGAGATGACTTTGTTGACGTTTTGCTCCATTTGGAGGGTGACGAAGAGCTTGCAGAAGATGACATGATTGCTGTTCTATGGGAGATGATATTCAGAGGGACCGATACAACGGCTCTATTAACCGAGTGGGTTATGGCCGAGTTAGTCTTAAACCAGCAAATCCAGCAAAACCTTCACAACGAAATCGCAAAGAATAATAACAATAAAAGCCACCTGACAGATGCTGACGTGGCCGAGCTGCCCTACTTACAGGCGGTGGTAAAGGAGACGTTGCGACTCCATCCACCCGGTCCACTCCTCTCCTGGGCCCGTCTCTCCACCTCGGACGTCCACCTCAGCAACGGCATGCTTATCCCGGCAAACACAACCGCCATGGTCAACATGTGGGCAATCACACACGACCCTCACGTGTGGGAGGACCCACTTGAGTTCAGTCCGGAGCGGTTCCTGCAAGCTGACGTGGACGTGAGGGGGAGTGACCTAAGGCTTGCGCCGTTTGGTGCTGGGCGTAGGGTTTGTCCAGGGAAGAACCTTGGCCTGGTGACGGTGCACCTATGGGTGGCTGAGTTGGTGCACCGTTTTAAGTGGGTCCCAGATGCAGTAGGTGGTCAACCAGTTGACTTGAGCGAGGTTCTGAAGCTGTCTTGTGAGATGAAGTTTCCTCTTCGTGCTGTGGCTCTGCAAAGGCCGTGA | 1617 | 51.64 | MEFGFDKKDPTSFCLFATFIGSKPQFLNDRYDLFLSLLLALTSLFLLPWAFSVGGTAWKNGRGRKNGAVLIPGPCGLPIFGSLFALSRGLAHRTLAAMAWSRGNTQLMAFSLGSTPVVVASDPHTAREILTSPHFADRPIKQSAKSLLFSRAIGFAPNGTYWRLLRRIASTHLFSPKRILAHETSRRLQCAVMLYNIAKEQKHEKTVLLRKHLQAASLNNMMGSVFGKRFDSDPANEELEEVQSLVREGFELLGAFNWSDYLPWLSCFYDPFRVNERCSEMVPRVRKLVKRIIQEHRDHNGSKNAVSDGDDFVDVLLHLEGDEELAEDDMIAVLWEMIFRGTDTTALLTEWVMAELVLNQQIQQNLHNEIAKNNNNKSHLTDADVAELPYLQAVVKETLRLHPPGPLLSWARLSTSDVHLSNGMLIPANTTAMVNMWAITHDPHVWEDPLEFSPERFLQADVDVRGSDLRLAPFGAGRRVCPGKNLGLVTVHLWVAELVHRFKWVPDAVGGQPVDLSEVLKLSCEMKFPLRAVALQRP | 538 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 9722159 | 9724098 | - | Conep09aG0133600.1 | Cone9ag1296 | 445459 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag1296 | 538 | Pfam | Cytochrome P450 | 72 | 509 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PANTHER | CYTOCHROME P450 78A7-RELATED | 23 | 533 | IPR051996 | - | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 435 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 392 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 216 | 234 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | CDD | CYP78 | 103 | 530 | - | - | |
| Cone9ag1296 | 538 | FunFam | Cytochrome P450 78A5 | 63 | 537 | - | - | |
| Cone9ag1296 | 538 | SUPERFAMILY | Cytochrome P450 | 71 | 537 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 474 | 483 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone9ag1296 | 538 | Gene3D | Cytochrome P450 | 59 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | P450 superfamily signature | 393 | 404 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | P450 superfamily signature | 481 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | P450 superfamily signature | 472 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1296 | 538 | PRINTS | P450 superfamily signature | 340 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone5ag0465 | Cone-Chr5:1967401 | Cone9ag1296 | Cone-Chr9:9722159 | 2.90E-15 | dispersed | |
| Cone7ag1429 | Cone-Chr7:10161380 | Cone9ag1296 | Cone-Chr9:9722159 | 1.25E-228 | dispersed | |
| Cone9ag0534 | Cone-Chr9:2552386 | Cone9ag1296 | Cone-Chr9:9722159 | 3.23E-152 | dispersed | |
| Cone9ag1296 | Cone-Chr9:9722159 | Cone19ag0648 | Cone-Chr19:5546701 | 3.55E-78 | dispersed | |
| Cone6ag1341 | Cone-Chr6:10811073 | Cone9ag1296 | Cone-Chr9:9722159 | 0 | wgd | |
| Cone7ag1408 | Cone-Chr7:10069988 | Cone9ag1296 | Cone-Chr9:9722159 | 1.68E-52 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag1296 | K20619 | - | cit:102627430 | 745.732 |