Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1308 ATGGAGCATAAGAATCCACAAAAACTCTCCTTTCTTCACTTGTTTTTCCTCTTATCACTACTGTTCAACAATCCCCATGCAACATTCTCTCAACTTGATTTTAACTTCTACGACAAAACATGTCCCAATCTGATCGGAATTGTTCGCTTTGGTGTCTGGTCTGCTATAAAAAACGACACTAGAATGCCTGCTTCTCTCTTGCGCCTTCATTTCCATGATTGCTTCGTTGATGGATGTGAAGGCTCTGTATTACTCGACGAAACAAGTACGATCAAGAGCGAGAAAACTTCATTCGCTAATACAAATTCGGCACGAGGTTTTGAGGTCATTGATGCAATAAAATCTAAACTAGAGGAAGCTTGCCCTTCTCTTGTTTCTTGTACTGATATTCTCACTCTAGCAGCAAGAGAGGCCGTATCTTTCGCTGGAGGTCCGTTTTGGCCCGTTCAGTTAGGCCGTAGGGACGGAAAAACTGCAAGTGCAGATGCAGCTAATGACCAATTGCCTTCACCTTTTGAACCCTTAGAAAATATTACTAGAAAGTTCACCTCTAAAGGCCTTGATCTTAAGGATGTTGTTGTGCTCTCAGGTGCACACACAATTGGGTTTGCTCAGTGTTTTACATTCAAGCCGAGGCTCTACAGCTCGGATGGACCGGACCCGACAATGGACGTATCACTGCAAAAAAGTCTACAAACCGTTTGTCCGAACCTAAGTGATTCCGACTCTAATCTGGTTGCTTTAGATCCAGTCACTTCTACCAAGTTTGACAACATATTTTACAAGAACTTGGTCAATAATTCAGGCCTTCTTCAATCGGACCAAGCTCTTATGAGCGATAACAAAACGGCTTCCATGGTGACATATTATAGCAACTTATCTTACATGTTTTCCAAGGACTTTGCAGTATCAATGATGAAGCTATCTAAAGTTGGTATCCTGACCGGGCAAAATGGCGAAATTAGGAAGAATTGTCGACTGGTGAACTAA 990 42.12 MEHKNPQKLSFLHLFFLLSLLFNNPHATFSQLDFNFYDKTCPNLIGIVRFGVWSAIKNDTRMPASLLRLHFHDCFVDGCEGSVLLDETSTIKSEKTSFANTNSARGFEVIDAIKSKLEEACPSLVSCTDILTLAAREAVSFAGGPFWPVQLGRRDGKTASADAANDQLPSPFEPLENITRKFTSKGLDLKDVVVLSGAHTIGFAQCFTFKPRLYSSDGPDPTMDVSLQKSLQTVCPNLSDSDSNLVALDPVTSTKFDNIFYKNLVNNSGLLQSDQALMSDNKTASMVTYYSNLSYMFSKDFAVSMMKLSKVGILTGQNGEIRKNCRLVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9822229 9823537 + Conep09aG0134900.1 Cone9ag1308 445471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1308 329 ProSiteProfiles Plant heme peroxidase family profile. 31 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 FunFam Peroxidase 169 308 - -
Cone9ag1308 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cone9ag1308 329 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 Gene3D - 35 329 - -
Cone9ag1308 329 FunFam Peroxidase 35 181 - -
Cone9ag1308 329 Pfam Peroxidase 52 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 CDD secretory_peroxidase 31 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone9ag1308 329 PANTHER PEROXIDASE 72-RELATED 18 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1308 329 Gene3D Peroxidase, domain 2 169 308 - -
Cone9ag1308 329 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0076 Cone-Chr7:326322 Cone9ag1308 Cone-Chr9:9822229 3.66E-84 dispersed
Cone9ag0507 Cone-Chr9:2423007 Cone9ag1308 Cone-Chr9:9822229 6.72E-79 dispersed
Cone9ag1186 Cone-Chr9:8467753 Cone9ag1308 Cone-Chr9:9822229 3.02E-73 dispersed
Cone9ag1308 Cone-Chr9:9822229 Cone9ag1575 Cone-Chr9:11337036 1.49E-67 dispersed
Cone6ag1379 Cone-Chr6:11081891 Cone9ag1308 Cone-Chr9:9822229 3.71E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1308 K00430 - mdm:103416003 460.685