Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1329 ATGGAGTGGGTTCGATTGAACGAGATCGGCCAAGGAAGCTTCGCAACAATCAGTTTGGCAGCAACCAGAAAAGGTACTCATCCTGCTCTGTTTCCTCCATTAGTGGCGGTCAAAACCTCAGAAGCAATAGACTGTGCTTCGCTTAAGCACGAGAAACAAGTTCTGGACCACCTCGGCCATTCTTGCCCACAAATAATACGTTGCTATGGAGACAGTCGCACTACAGAAAACAGAGAAGAGTTTTATAATATCTTATTAGAATACGCTAGTGGAGGAAGTTTAGCCGGTAAAATTGGCGGGAAGTTGCCGGAATTTGAAGTCAGGAAATACACGAGGGCGATACTTAAAGGGCTTAGTTATATTCATTCGAAGGGGGTTGTTCATTGCGATATAAAGCCACAGAATATTCTACTGCTCAAGAATGGCGATTTGAAGATTGCTGATTTCGGATTGGCGGTGAAGAAAACAACGGAAGAAGAAAACAGGGGAGGAAGAGGGACAGAGGGGAGAAGGGCCGAGATTAGGGGGACGCCGTTGTATATGGCGCCGGAATCGGTTAATGATAATGAGTACGGCTTTCCGTCCGATGTGTGGGCCCTTGGGTGTGTCGTGGCGGAGATGGTGTCGGGGAAACCAGCGTGGGATCCACGAGCGGGATCGAATATGTATGCGTTGATGATTCGGATTGGGGTCGGGGACGAATTACCGAATATACCCTCAGATTTGTCGGAGGAAGGGAGAGACTTTTTGGGGAAGTGCTTTGTGAAAGATCCTAGAGAGAGATGGACGGCGGAGATGCTTTTGAATCATCCTTTTTTGCGTTGTTGCGGTGATGATGATGTCGACGACGACGATGATAATTGTACGGTTAGATTGAATCGATTTGGTGATGAGTTGCCTAAGTCGCCTATTTGTCCGTTTGATTTTGGAGTATGGGATTCGGTGCATTGTAATTCTTCTATATTGCCGGAATCCTCGTCGGGAGTTAGGCCGGCCGGTTTTTCAGCTGGAGACCGGTTACGGCAGCTTGTGACAAGGGAGGTTATTGATTGGTCTGATTCTGACAGTTGGGTTACTTTAAGATGA 1086 47.33 MEWVRLNEIGQGSFATISLAATRKGTHPALFPPLVAVKTSEAIDCASLKHEKQVLDHLGHSCPQIIRCYGDSRTTENREEFYNILLEYASGGSLAGKIGGKLPEFEVRKYTRAILKGLSYIHSKGVVHCDIKPQNILLLKNGDLKIADFGLAVKKTTEEENRGGRGTEGRRAEIRGTPLYMAPESVNDNEYGFPSDVWALGCVVAEMVSGKPAWDPRAGSNMYALMIRIGVGDELPNIPSDLSEEGRDFLGKCFVKDPRERWTAEMLLNHPFLRCCGDDDVDDDDDNCTVRLNRFGDELPKSPICPFDFGVWDSVHCNSSILPESSSGVRPAGFSAGDRLRQLVTREVIDWSDSDSWVTLR 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9976718 9978077 + Conep09aG0137000.1 Cone9ag1329 445492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1329 361 SUPERFAMILY Protein kinase-like (PK-like) 3 281 IPR011009 -
Cone9ag1329 361 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 274 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone9ag1329 361 ProSiteProfiles Protein kinase domain profile. 3 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1329 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1329 361 SMART serkin_6 3 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1329 361 Pfam Protein kinase domain 5 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1329 361 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524(InterPro)
Cone9ag1329 361 Gene3D Transferase(Phosphotransferase) domain 1 2 296 - -
Cone9ag1329 361 CDD STKc_MAPKKK 2 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1037 Cone-Chr7:7980858 Cone9ag1329 Cone-Chr9:9976718 4.31E-72 dispersed
Cone7ag1039 Cone-Chr7:7988622 Cone9ag1329 Cone-Chr9:9976718 1.03E-75 dispersed
Cone8ag1426 Cone-Chr8:11113054 Cone9ag1329 Cone-Chr9:9976718 3.23E-60 dispersed
Cone9ag1239 Cone-Chr9:9076150 Cone9ag1329 Cone-Chr9:9976718 6.36E-41 dispersed
Cone9ag1329 Cone-Chr9:9976718 Cone19ag1354 Cone-Chr19:8993247 5.72E-28 dispersed
Cone1ag1174 Cone-Chr1:55782217 Cone9ag1329 Cone-Chr9:9976718 9.51E-40 wgd
Cone12ag0124 Cone-Chr12:665003 Cone9ag1329 Cone-Chr9:9976718 5.59E-113 wgd
Cone6ag1401 Cone-Chr6:11268172 Cone9ag1329 Cone-Chr9:9976718 1.59E-229 wgd
Cone6ag1281 Cone-Chr6:10240385 Cone9ag1329 Cone-Chr9:9976718 2.88E-40 wgd
Cone8ag0131 Cone-Chr8:677629 Cone9ag1329 Cone-Chr9:9976718 3.14E-110 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83212 PF08590 DUF1771 1.10E-11 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1329 - - - 0.0