Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1347 ATGAGGAAATCTATGCAGCGTCTCCTTGCTCTGTTTTCTTTTCTTGTAGTTCAAGCTTTCGCCTTGAATAAAGATGGCATTTTTCTGCTCTCCTTTAAGTCCTCTGTTCAAAAAGACCCTTTGTCCAAGCTACAGAACTGGAATCCTTACGATGAAACTCCATGCTTCTGGAATGGAGTTAAATGCTCTACCTCTCCTTCTTCTTTTTCGTCCTCTACTCCTGCTAGGGTGATAGAGTTATCTTTACCCAGCTCAGGCATTCTTGGTTCGATCTCACCTGATCTAGGGCTAATTGAAAATCTTCAGAGCCTTAACCTCTCTAACAATTCCTTCAGTGGGTCTCTTTCGACGTCGTTTTTTAACGCCACGAAGCTTCAGATTCTCGATTTGTCCAGCAATTTGATTTCCGGCGAGTTTCCGGAGAGTATATCCAGGCTCAGAAGTCTGCAGGTTCTTAATATTTCCGATAATGCGTTGGCGGGAAAACTTCCTGTAAATATAACCGTTCTGAGTAATCTCACTGTCGTTTCGTTGAAGAATAATTACTTTTCCGGGAGTCTTTCCGGCGGATTTGGTGAATCTGTTCAAGTTCTAGATCTGTCTTCGAATCTTATCAATGGGTCTCTGCCTTCTGATTTTGGAGGAGATGGTTTACGTTACTTCAATATTTCTTACAACAAACTTTCAGGGGAGATTCCGGGCGGGTTTTTTGAGAACATTCCGGATCAAGCTGTCCTTGATTTCTCATTCAACAATCTCTCTGGCGAGATTCCTCAGTTGAAGATTTTTACTTATCAGAAAACGTCGTCGTTTTCCGGGAATCCTGATCTATGTGGACGACCCACTGGGATTCCTTGTCCTATCGTTTCTTCGCCGGCTTTTGCTCCAAACGTGACTGTCCCATCTGATTCTCCTCCGGCAATAGCTGCGATTCCGAAAATGGACCCGAATGGGCCGGCCCGAGGGTCCAACTCAACCGGTTCAGAACTAGGCGCGACTAAACAAAGCAGGACATGGGTCAAACCCACTACGATCATTGCGATCGTGTTTGCAGATGTTGCCGGAATCGGAATCCTCCTCTTTGTTTTCTCGTGCATATGCAGCTCCAAGCGAAAGTCAAAGAAAATTGAGGCCGATCTCAAGCTCGAAGCGAGCTTAGCGAGAGAGAATTGGTCAACATCGTCTTCTTCCGAAGAATCCAGAGGCTTTACAAAATGGTCATGTCTAAGGAAAAGAGGGAACGAAGGAGGCAAGGAAGAAGAGGAAGACGACGAGGAGAATTCAGAAGCCGGTACCGGAGAAGAAAACCAAACCGGTCAAACAAATCAGGGGTTGAGAGAGCAGGGGCATGGTAAGAGAGGGACGTTAGTGATCGTTGATGGGGAGAAGGAATTGGAGCTGGAGACATTGCTAAAAGCTTCAGCTTATATCTTAGGGGCGACCGGGTCGAGCATAATGTACAAGGCGGTTCTTGAAGATGGGACGAGCCTAGCGGTTCGTAGGATCGGGGAGAATCATGTGGAGCGTTTCAAGGAGTTCGAGAGCCAGATCAAGATCGTGGCCAAATTGGTGCACCCCAATTTGATTCGGGTTCGTGGCTTTTATTGGGGCCTTGATGAGAAGCTCATCATCTATGACTTCGTTCCCAACGGTAGTCTTGCCAATGCTCGTTACAGCTGA 1680 46.37 MRKSMQRLLALFSFLVVQAFALNKDGIFLLSFKSSVQKDPLSKLQNWNPYDETPCFWNGVKCSTSPSSFSSSTPARVIELSLPSSGILGSISPDLGLIENLQSLNLSNNSFSGSLSTSFFNATKLQILDLSSNLISGEFPESISRLRSLQVLNISDNALAGKLPVNITVLSNLTVVSLKNNYFSGSLSGGFGESVQVLDLSSNLINGSLPSDFGGDGLRYFNISYNKLSGEIPGGFFENIPDQAVLDFSFNNLSGEIPQLKIFTYQKTSSFSGNPDLCGRPTGIPCPIVSSPAFAPNVTVPSDSPPAIAAIPKMDPNGPARGSNSTGSELGATKQSRTWVKPTTIIAIVFADVAGIGILLFVFSCICSSKRKSKKIEADLKLEASLARENWSTSSSSEESRGFTKWSCLRKRGNEGGKEEEEDDEENSEAGTGEENQTGQTNQGLREQGHGKRGTLVIVDGEKELELETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGENHVERFKEFESQIKIVAKLVHPNLIRVRGFYWGLDEKLIIYDFVPNGSLANARYS 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10099847 10102669 - Conep09aG0138800.1 Cone9ag1347 445510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1347 559 MobiDBLite consensus disorder prediction 412 450 - -
Cone9ag1347 559 Gene3D Phosphorylase Kinase; domain 1 446 547 - -
Cone9ag1347 559 MobiDBLite consensus disorder prediction 432 448 - -
Cone9ag1347 559 SUPERFAMILY Protein kinase-like (PK-like) 477 555 IPR011009 -
Cone9ag1347 559 Pfam Leucine Rich Repeat 218 236 IPR001611 GO:0005515(InterPro)
Cone9ag1347 559 Pfam Leucine Rich Repeat 194 214 IPR001611 GO:0005515(InterPro)
Cone9ag1347 559 SUPERFAMILY L domain-like 23 281 - -
Cone9ag1347 559 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515(InterPro)
Cone9ag1347 559 Pfam Leucine rich repeat N-terminal domain 22 63 IPR013210 -
Cone9ag1347 559 PANTHER OS05G0588300 PROTEIN 170 555 IPR050994 -
Cone9ag1347 559 MobiDBLite consensus disorder prediction 319 335 - -
Cone9ag1347 559 ProSiteProfiles Protein kinase domain profile. 472 559 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1347 559 FunFam Leucine-rich repeat receptor-like protein kinase 22 189 - -
Cone9ag1347 559 MobiDBLite consensus disorder prediction 311 335 - -
Cone9ag1347 559 Gene3D Ribonuclease Inhibitor 192 287 IPR032675 -
Cone9ag1347 559 Gene3D Ribonuclease Inhibitor 22 191 IPR032675 -
Cone9ag1347 559 FunFam Leucine-rich repeat receptor-like protein kinase 194 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag1108 Cone-Chr8:9866904 Cone9ag1347 Cone-Chr9:10099847 3.63E-83 dispersed
Cone9ag1347 Cone-Chr9:10099847 Cone13ag0803 Cone-Chr13:7406610 4.19E-42 dispersed
Cone9ag1338 Cone-Chr9:10055351 Cone9ag1347 Cone-Chr9:10099847 6.05E-15 proximal
Cone6ag1421 Cone-Chr6:11390191 Cone9ag1347 Cone-Chr9:10099847 3.99E-256 wgd
Cone8ag0145 Cone-Chr8:757781 Cone9ag1347 Cone-Chr9:10099847 3.98E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1347 - - - 0.0