Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1350 ATGAATTTGGTAAATTATAGGTTTGGTACTGAGCTTTTAGGCCAGGTGTCTGCATCTCTTGATGCTTTTATTGATATTACCGGTGGGAAAGTAAATATCCATGTCCTGATGGCTCTTGCAGCATTTGCTTCCATCTTTATGGGGAACTCCTTAGAAGGAGGACTACTTCTTGCCATGTTCAACATATCTCACATTGATTTGGCATACAAAAGGGTGCCCGTGCATGGTGTAGAAGTGGGTTCATATCTCTTGGTTGGAGCTGGTGAGGAGTTGCTTCCTTGTCAGATTATCCCATGGTATAATTTGATAGTTTTCCCAAGAGAAATCAAACTACTAGAGATAAAAGTGGGAGACAGTGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAGTAGTGAAGGCAACAAAGACATGGAAAGAGACGACATCAAGCAAGATTGTGCAATTGACTGAAGAAACACAATTGAATAAACCAAAGCTTCAAAGGTGGCTAGATGAGTTTGGTGAGCATTACAGTAAGGCGGTGATAGTTTTGTCCATTGCAATTGCACTTTTCGGTCCCTTGTTGTTTAAATGGCCATTTATTTCTACACCAGCTTGTAGAGGATCGGTTTACAGAGCACTGGGCCTCATGGTGGCAGCATCACCTTGTGCCCTCGCTGTGGCTCCATTGGTGTATGCAACTGCAATCAGTTCCTGTGCAAAAAGGGGGATATTGCTCAAAGGTGCGCATGTACTTGATGCCCTTGTTTCTTGCCACACTGTAGCATTTGATAAAACTGGGACTTTGACAACCGGTAGGCTTGTGTCCAAGGCAATTGAACCCATATATGGACATAAGAACAGAGAAAACAAATCAAATTTCACTTCCTGTTGTATTCCCAGCTGTGAAAAGGAAGCTCTTGCTGTGGCAGCTGCCATGGAAATGGGTACACTACTCACCCAATTGGAGGTAACCTTAGCAGTGGTAAACCATAGTGCAGGGAAAGAACTTCCTTCTGTTTCTGTTGAAAATTTTGAGTATTTTCCTGGTAGAGGTCTTGTTGCAACTCTGAACGGCATTAAGGAAATGGCTCTGCTCATGACTTCTTTTTAA 1098 42.9 MNLVNYRFGTELLGQVSASLDAFIDITGGKVNIHVLMALAAFASIFMGNSLEGGLLLAMFNISHIDLAYKRVPVHGVEVGSYLLVGAGEELLPCQIIPWYNLIVFPREIKLLEIKVGDSVPGGARNLDGRIVVKATKTWKETTSSKIVQLTEETQLNKPKLQRWLDEFGEHYSKAVIVLSIAIALFGPLLFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLVYATAISSCAKRGILLKGAHVLDALVSCHTVAFDKTGTLTTGRLVSKAIEPIYGHKNRENKSNFTSCCIPSCEKEALAVAAAMEMGTLLTQLEVTLAVVNHSAGKELPSVSVENFEYFPGRGLVATLNGIKEMALLMTSF 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10126878 10129824 - Conep09aG0139100.1 Cone9ag1350 445513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1350 365 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 12 65 IPR051949 -
Cone9ag1350 365 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 259 353 IPR023299 GO:0000166(InterPro)
Cone9ag1350 365 Gene3D - 254 266 IPR023214 -
Cone9ag1350 365 Pfam E1-E2 ATPase 112 237 - -
Cone9ag1350 365 ProSitePatterns E1-E2 ATPases phosphorylation site. 259 265 IPR018303 -
Cone9ag1350 365 Gene3D - 136 152 - -
Cone9ag1350 365 SUPERFAMILY Calcium ATPase, transmembrane domain M 35 246 IPR023298 -
Cone9ag1350 365 Gene3D - 153 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1423 Cone-Chr6:11416895 Cone9ag1350 Cone-Chr9:10126878 1.50E-182 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1350 K01534 - mtr:25493499 494.582