Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1354 ATGGAGGAGTTAAGCACAGTGATCTTTTATGTATGTCTGTCCCTTCTCTTCTTCCTCATCCCTTTGAATCTTTTGCTGCGAGCAAAATACCGTCGCAAAAACCTACCGCCTAGTCCGCCTTCTCTCCCGCTTATCGGCCATCTCCACCTCATAAAACTCCCCGTCCCCCGCACTCTTCGCAACCTCTCGCAGAAATACGGGCCCGTTATCTCTCTCCGGTTCGGGTCCCGCCTAGTAGTCGTCATCTCCTCCCCTTCTGCGGCAGAAGAATGCTTCACCAAAAACGACATCACTCTAGCCAACCGCCCTCCCTTGCTCATAGGGAAGCACATCGGCTACAATTATTCGACCGTCGCGGCCTCACCATACGGGCCCCACTGGCGGAACCTCCGCCGCATCAGTGCGACCGAGATCTTCTCCACCAACCGACTCAACCTCTTCTCAGCGGTTCGAAGAGACGAAGTGAAGCGCTTATTGATCAAACTGTCTAAAGATTCGTTAAGCGAGTTCTCCAAAGTGCAGCTCCAGTCTATGCTTTCGGAAATGACGTTCAACATTCTGATGACGATGATAGCGGGCAAGAGGTATTACGGTGATGACGTGGCAGATAAGGAAGAAGCGAGGCAGTTTACGGACATGGTGAAGAAGATTGCATCGCATGGCGGCGCGGCGAATCGGGGCGAATACGTGCCGATTTTGAAGTGGATCAATCGGAACGGGTACGAAAAGAGTGTGGTGGGTCTTGCTAGGAAGATGGATGGGATGTTGCAGGAATTGGTTGATGAGCAAAGGAGGAGGAAGAAGGAGGTCAAGGGAAGAAACAGTATGATCGATCATTTGCTGTCGTTGCAGGAATCAGAGCCTGATTACTACAGCGACAAGATAATCAAAGGGTTCATAGTGGTACTGTTGCTTGCCGGAGTTGACACGTCAGCAGTGACGATAGAATGGGCGATGAGTAATCTTCTGAACAATCCTGACGTGTTGAAGAAAGCTAGGGCTGAGCTGGACTCTGAGATCGGACAAGAACGACTAGTTAACGAAGCTGACGTGTTCAAATTACCATATCTTCAAGGAATCATCTCAGAAACACTCAGACTGTACCCACCGGCCCCACTGCTTCTGCCTCATTACTCATCCGACGACTGCACAGTAGGAGGGTATGACGTACCAGGTGGCACGATCGTGTTGGTCAACGCATGGGCCATACATAGAGACCCGAATTTATGGGCCGATCCCGAGCATTTTAAGCCCGAGAGACATATGCATGAAGAGGCCCAAGAAGGTGATAATAATTCTGATCAAGGGCCAGCTAAGTATTTGCCATTTGGGTTAGGAAGGAGATCTTGTCCTGGATCGGCAATGGGTCAACGGGTCGTGGGCTTAGGATTGGGAGCTTTGATCCAGGGTTTTGAGTGGGAGAGAGTGAGTGAAGAGGAAGTTGATATGAGTGAAGGCAAAGGCGTCACTATGCCTAAGGTAGTCCCTTTAGAAGCCATGTGTAGAGCAAGACCCATTATGAATAAGGTTCTTGATGAAGCACCAACTATTCATTAA 1557 49.9 MEELSTVIFYVCLSLLFFLIPLNLLLRAKYRRKNLPPSPPSLPLIGHLHLIKLPVPRTLRNLSQKYGPVISLRFGSRLVVVISSPSAAEECFTKNDITLANRPPLLIGKHIGYNYSTVAASPYGPHWRNLRRISATEIFSTNRLNLFSAVRRDEVKRLLIKLSKDSLSEFSKVQLQSMLSEMTFNILMTMIAGKRYYGDDVADKEEARQFTDMVKKIASHGGAANRGEYVPILKWINRNGYEKSVVGLARKMDGMLQELVDEQRRRKKEVKGRNSMIDHLLSLQESEPDYYSDKIIKGFIVVLLLAGVDTSAVTIEWAMSNLLNNPDVLKKARAELDSEIGQERLVNEADVFKLPYLQGIISETLRLYPPAPLLLPHYSSDDCTVGGYDVPGGTIVLVNAWAIHRDPNLWADPEHFKPERHMHEEAQEGDNNSDQGPAKYLPFGLGRRSCPGSAMGQRVVGLGLGALIQGFEWERVSEEEVDMSEGKGVTMPKVVPLEAMCRARPIMNKVLDEAPTIH 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10143679 10145328 - Conep09aG0139500.1 Cone9ag1354 445517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1354 518 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 SUPERFAMILY Cytochrome P450 36 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone9ag1354 518 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 Gene3D Cytochrome P450 23 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 FunFam Cytochrome P450 family protein 27 507 - -
Cone9ag1354 518 PANTHER CYTOCHROME P450 82C3-RELATED 16 504 IPR050651 -
Cone9ag1354 518 CDD CYP81 67 497 - -
Cone9ag1354 518 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag1354 518 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0151 Cone-Chr12:773670 Cone9ag1354 Cone-Chr9:10143679 5.25E-224 dispersed
Cone12ag0152 Cone-Chr12:779219 Cone9ag1354 Cone-Chr9:10143679 6.26E-230 dispersed
Cone5ag1553 Cone-Chr5:10799009 Cone9ag1354 Cone-Chr9:10143679 4.22E-193 dispersed
Cone7ag1261 Cone-Chr7:9368226 Cone9ag1354 Cone-Chr9:10143679 1.55E-231 dispersed
Cone7ag1408 Cone-Chr7:10069988 Cone9ag1354 Cone-Chr9:10143679 3.30E-103 dispersed
Cone7ag1411 Cone-Chr7:10084772 Cone9ag1354 Cone-Chr9:10143679 4.21E-104 dispersed
Cone9ag1354 Cone-Chr9:10143679 Cone9ag1520 Cone-Chr9:11094177 3.52E-90 dispersed
Cone9ag1354 Cone-Chr9:10143679 Cone9ag1355 Cone-Chr9:10151995 5.06E-241 tandem
Cone12ag0150 Cone-Chr12:770894 Cone9ag1354 Cone-Chr9:10143679 1.90E-231 wgd
Cone6ag1427 Cone-Chr6:11441685 Cone9ag1354 Cone-Chr9:10143679 8.99E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1354 K13260 - mdm:103401458 634.409