Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag1355 | ATGGGAGAAGCACTAGTCCTTTACCTTCCCCTGTCTCTCCTCTCCCTACTCCTCGCTTTCAAGCTCTTGTTACGAACAAAGGCCCGTCGGAAAAACCTACCCCCTAGTCCACCTTCTCTCCCCGTCATCGGACACCTCCATCTCCTTAAACTCCCCATCCAACAAACTTTTCGCAAACTCTCACAAAAATACGGACCCGTTTTCTCTCTCTGGTTCGGGTCCCGCCTTGTAGTCGTCGTCTCCTCTCCCTCTGCAGTTGAAGAATGCTTAACCAAAAACGACATCGGGGACCACTGGCGGAACCTCCGCCGCATTGGTGCCATCGAGATCTTCTCCACCAAACGTTTAAACGCCTTCACAGAGAGTCGAAGAGATGAAGTGAAGCGCTTATTGCTTAAACTGTCCGAAAATTCAATACAAAATTTTTCTAAAGTGAAGCTTCAACCGATGTTTGAAGAACTAACCTTTAACATTGTAATGAGAATGGTGGCAGGGAAGAGGTACTATGGGGATGAAGTGGCGGACGAGGAAGAGGCAATGAAATTTAGAGAAACAGTGAAGGAGGCCGCAGCGCATGGCGGGGCCGCGAATCCCGGTGACTTCTTACCCGTTTTGAATTGGGTTGGTCTTAACGGGTATGAGAAGAGTGTGGTGAGTCTTGCTAAGAGGATGGATGAGTTGTTGCAGGGATTGATTGATGAACAAAGGAGAAAGAAGGAAGAGGGCAAGAATACTATGATTGACCATTTATTGTGTTTGCAAGAGTCGCAACCGGATTACTACAACGACAAAATAATCAAAGGTCTCATATTAGTAATGTTACTTGCGGGAATTGACACATCATCAGTGACGTTGGAATGGGCAATGTGTAATTTACTCAATCACCCCTCTGTATTAAGAAAGGCAAGAGCTGAGCTGGACTCACAGATTGGACAGGAACGACTGGTTACTGAGCTTGACATGTCTAACTTACCCTACCTTCAAGGAATCATCTCAGAGACGCTTCGGCTATATCCAGCAGCACCGCTACTCCTCCCTCATTTCTCATCCGATGATTGTACGGTCGGAGAGTATGACATACCACGTGGCACGATTGTTTTGTTCAATGCATGGGCCATGCATAGGGACCCAGACTTGTGGACTGATCCGACGAGCTTCAATCCTGAAAGACATGGAATTGATCAAGAAAATAATAGTCGGATGGATTCATCGGTGCACAAATTTATCCCATTCGGATTGGGAAGGAGGGCTTGTCCTGGATCTGGTATGGCCCAAAGAATTGTGGGCTTGGGCTTGGGATCATTGATTCAATGCTTCGAGTGGGAGAGAGTTAGTGACGAAGAAATAGACATGACAGAAGGTAAAGGGCTCACCATGCCTAAAGCTGTGACATTAGAAGCCATGTGTAAAATAAGACCTATTATGCATAAAATCTTGAAGGATACAAGTAATGGTGTTTAA | 1461 | 46.06 | MGEALVLYLPLSLLSLLLAFKLLLRTKARRKNLPPSPPSLPVIGHLHLLKLPIQQTFRKLSQKYGPVFSLWFGSRLVVVVSSPSAVEECLTKNDIGDHWRNLRRIGAIEIFSTKRLNAFTESRRDEVKRLLLKLSENSIQNFSKVKLQPMFEELTFNIVMRMVAGKRYYGDEVADEEEAMKFRETVKEAAAHGGAANPGDFLPVLNWVGLNGYEKSVVSLAKRMDELLQGLIDEQRRKKEEGKNTMIDHLLCLQESQPDYYNDKIIKGLILVMLLAGIDTSSVTLEWAMCNLLNHPSVLRKARAELDSQIGQERLVTELDMSNLPYLQGIISETLRLYPAAPLLLPHFSSDDCTVGEYDIPRGTIVLFNAWAMHRDPDLWTDPTSFNPERHGIDQENNSRMDSSVHKFIPFGLGRRACPGSGMAQRIVGLGLGSLIQCFEWERVSDEEIDMTEGKGLTMPKAVTLEAMCKIRPIMHKILKDTSNGV | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 10151995 | 10153683 | - | Conep09aG0139600.1 | Cone9ag1355 | 445518 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag1355 | 486 | PANTHER | CYTOCHROME P450 82C3-RELATED | 16 | 472 | IPR050651 | - | |
| Cone9ag1355 | 486 | SUPERFAMILY | Cytochrome P450 | 34 | 472 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 369 | 393 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 285 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 328 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 265 | 282 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 408 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 154 | 172 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | E-class P450 group I signature | 418 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | CDD | CYP81 | 65 | 465 | - | - | |
| Cone9ag1355 | 486 | FunFam | Cytochrome P450 family protein | 95 | 475 | - | - | |
| Cone9ag1355 | 486 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 411 | 420 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone9ag1355 | 486 | Pfam | Cytochrome P450 | 34 | 93 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | Pfam | Cytochrome P450 | 96 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | P450 superfamily signature | 409 | 418 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | P450 superfamily signature | 418 | 429 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | P450 superfamily signature | 276 | 293 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | PRINTS | P450 superfamily signature | 329 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1355 | 486 | Gene3D | Cytochrome P450 | 19 | 476 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone9ag1355 | Cone-Chr9:10151995 | Cone17ag0067 | Cone-Chr17:364272 | 1.08E-83 | dispersed | |
| Cone9ag1354 | Cone-Chr9:10143679 | Cone9ag1355 | Cone-Chr9:10151995 | 5.06E-241 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag1355 | K13260 | - | mdm:103401458 | 622.468 |