Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1372 ATGGCTTTCAACTTTTCAACTCTTCTCTACCTCTTTAGTTTAATAACTCTTGTTTCCTCCCCACTAGTTTTTGCTCAACTTAGACCCAATTTCTACGCAAATATTTGTCCAAACGTGGAAAACATTGTCCAAAATGCCGTTGCTAATAAAGTTCGACAGACTTTTGTGACGGTTCCAGCCACTCTCCGCCTCTTCTTCCACGATTGCTTTGTCCAAGGATGTGATGCGTCAGTGATAGTTGCTTCATCCGGAGGCAATCAGGCGGAGAAGGATCATCCGGATAACTTGTCGCTTGCCGGAGACGGATTCGATACTGTCATCAAAGCCAAGGCGGCAGTTGATGCAGTCCCCCAGTGCAAGAACAGAGTCTCTTGTGCTGACATTCTTGCTCTGGCTACTCGTGATGTTATTGCATTGTCAGGAGGACCGTCATACACGGTGGAGCTTGGGCGGTTGGACGGCCTTGTTTCCAGGACCTCTGATGTGAATGGAAAGCTTCCACAGCCTACGTTTAGTTTGAATCAGCTTAATTCCTTGTTTGCTTCTCACGGTCTAACTCAACAAGACATGATTGCTCTCTCAGCTGCACACACCGTTGGATTCTCCCATTGTAACAGGTTTGCGAACAGGATCAATTCAATTCCAGTGGACCCTACACTAAACAAGACTTATGCGAGCCAGCTACAGCAGATGTGTCCGAAGAATGTGGACCCAAGAGTAGCCATCAACATGGACCCAATCACGCCCAGAGTTTTCGACAACACCTACTTTAAGAATCTTCAGCAGGGAATGGGCCTCTTCACCTCGGACCAAGTTTTATTCACAGATCCAAGATCTAGGCCCACTGTAAATACTTGGGCCTCTAACTCTCCCGCCTTTTCAAGAGCCTTCGCTAATGCCATGATCAAGCTGGGCCGGGTTGGAGTTAAGTCTGGTAGCAATGGGAATATTCGTCGCGATTGTGGAGCTTTCAATTAG 978 47.24 MAFNFSTLLYLFSLITLVSSPLVFAQLRPNFYANICPNVENIVQNAVANKVRQTFVTVPATLRLFFHDCFVQGCDASVIVASSGGNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCKNRVSCADILALATRDVIALSGGPSYTVELGRLDGLVSRTSDVNGKLPQPTFSLNQLNSLFASHGLTQQDMIALSAAHTVGFSHCNRFANRINSIPVDPTLNKTYASQLQQMCPKNVDPRVAINMDPITPRVFDNTYFKNLQQGMGLFTSDQVLFTDPRSRPTVNTWASNSPAFSRAFANAMIKLGRVGVKSGSNGNIRRDCGAFN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10271697 10273540 + Conep09aG0141300.1 Cone9ag1372 445535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1372 325 Gene3D Peroxidase, domain 2 167 304 - -
Cone9ag1372 325 CDD secretory_peroxidase 26 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone9ag1372 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
Cone9ag1372 325 FunFam Peroxidase 167 304 - -
Cone9ag1372 325 Gene3D - 30 325 - -
Cone9ag1372 325 PANTHER - 14 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cone9ag1372 325 Pfam Peroxidase 43 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone9ag1372 325 FunFam Peroxidase 30 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0160 Cone-Chr12:814036 Cone9ag1372 Cone-Chr9:10271697 3.42E-23 dispersed
Cone8ag0155 Cone-Chr8:800105 Cone9ag1372 Cone-Chr9:10271697 3.69E-170 dispersed
Cone9ag1372 Cone-Chr9:10271697 Cone8ag1449 Cone-Chr8:11205720 1.38E-72 dispersed
Cone6ag1447 Cone-Chr6:11576611 Cone9ag1372 Cone-Chr9:10271697 2.29E-222 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1372 K00430 - csv:101206860 521.546