Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1375 ATGATGTTGAGGAGGAAATCACTTGGATTCATCTTGTTTTTCATTCTCTTAATATCGGCCCCATTCTCGATCAAATCAATCCCAATTACATTCGAATCCGTCATTGATGACACTGCTTCTACTACCACAATTTCGAGTAGACCTAGAAGAATTCTTCACCAGCCACTTTTTCCGGTAAGCTCCACTCCACCGCCGTACTCCGACCCCGAGCCACTGCCGCCACCACCACCACCACCACCACCACCAGACTCTTCTTCTTCTTCTCCGCCTTTTTTCAACGAGCAACCGACAGGTTCGACTCCAGATCAGAGTCAACCGACTCCTCTTAATTCCAATGGAACTATGCCGATTCCAGCTGCGACGCCACCGTCGAAGCCGACGAAAACCGTAGCCGTTGCAATCTCAGTCGGAATCGTCACTCTAGGAATGCTCTCTGCTCTTGCATTCTTTCTCTATCGTCACCGCTCGAAGCATCCAGGTGAGACGGAGAAGCTAGTCGGAGGTAGTAATAGCATCAACAATTCGCAGAGGTTTCCAGAAGATTCTAGAGTTCCGCCTTCGAGCTTCCTCTACATTGGAACTGTTGAACCGAGTCAGAGCTCAGTCGTCGAGCAGAACGGTGTGAACGCAAATGCTAACAGTTCGCCTTATAGCAAACTGAAATCGGTTAAAAGATCTTCGGATCGGTACCGTCCTAGTCCTGAACTGCAGCCATTGCCGCCGTTACCTAACCCGCCAGTGATAGATTCTCCGTCTGAGATTTCTTCGTCGGAAGAAGAGTACGAGGAAAGTCACGATAATACGGCATTTCATACTCCTCTGGCTTCGTCTGTGGTTAGTTATGACGACGGTTTTTACTCGCCGCCTTCGCGCCTGAGAAATCCAGTTCACAGTAGTTACAGTGTACCTGCACGAATCGATTCTCAATTTAACAACAACAATAATAACAGTAACTATAATAATATTACTTCTGTTCCTCATTCCAAAAGAACTTCACCAAAATCTCGGCTCTATGTTTCAACGACAAAGCAGACTCAGCCTACACCGCCGCCTCCACCACCTCCACCTCCTCCTCAGGCAACGAGACAACAGCCACCTCAATCAACGATATCTTTTTCTTCTTCCTCTCCTCCAAGAAGGCCGAAATTTTCATCTCCACCTCCACCACCTAATTTGGCACTTCTTCAATCAATAAGCAATCGATCGGGGGCTCCACCTCCACCACCACCGCCTCCACCATCACTATCAATACCTGGGAAAGTAAAACCTTCAGATTCAAATGTTTCTAGATTGCCTCGACAATTCTTGTCAGAGCCAAAATTTCCAGTTCCTACAAGGCCTAAAGCTCATTCTATTTCTCGTTCTGGTACTTCAACTTCAGTTGAAGAACCTGTGGAAAACCCAAATTCTTCAGAGAAGCATGATGGTGAAGGAGCGAGACCCAGATTGAAGCCTTTGCACTGGGACAAAGTGCGAGCAACTTCTGACCGAGCCACTGTTTGGGACCAACTTAAGTCGAGCTCATTTCAATTGAATGAGGACATGATGGAGACTCTGTTCTGCTTCAACTCTGCAAATGCTGCCACGAAAGAGGTAACTAGAAAATCGGTTCTGCCTCCGGTTGAAAAAGAAAACAGAGTGTTAGATCCTAAGAAGTCGCAAAACATTGCGATTCTGTTAAGAGCATTGAATGTGACTCGTGAAGAGGTGACTGAATCTCTTTTAGATGAAGGCTTGGGTCCCGAACTACTGGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATTAAACTCCGAGACTACCATGGTGACGTCTCAAAACTAGGATCCGCGGAACGATTTCTCAAGGCAATTCTTGATATTCCATTTGCCTTTAAAAGAGTTGAAGCCATGCTATACCGTGCCAACTTTGATACAGAAGTGAAATACCTCAGGAATTGTTTTCAAACCCTAGAGGCTGCAAGTGGAGAATTGAAGAACAGCCGACTATTCCTTGCACTCCTTGAGGCTGTTCTTAGAACAGGAAACAGAATGAATGTTGGAACCAATAGAGGAGATGCCAAAGCATTCAAACTAGATACTCTTTTAAAACTAGTTGATATAAAGGGAACAGATGGAAAGACCACACTCCTCCATTTTGTTGTCCAGGAAATTATTCGGTCTGAAGGTGTTGGTACAAATGAAAACAATCAAATCAAAACCCAAGCAAAAATGAAAGATGATGACTTCAACAAGCAAGGATTGCAGGTTGTGTCTGGATTAAGCAGAGACCTAGTCCATGTGAAAAAAGCAGCTGGAATGGATTCTGATGTCTTAAGCAGTTATGTCTCTAAGCTTGAAATCGGGCTTGAGAAAGTCAGATTGGTCTTGCAGTATGCGAAAAATCCGGACATGGAGGGTAAGTTCTTTCACTCAATGAAACTGTTTTTGAAAGAGGCTGAAGAAGAGATGACAAGGATCAAGGCCGATGAGAAAAAGGCTTTATCACTTGTCAAAGGGGTTACGGAATATTTTCATGGCGATGCAGCAAAGGAAGAAGCACATCCATTTCGGATTTTTATGATCGTAAGAGATTTTCTTTCCATTTTGGACCAAGTTTGTAACGAAGTTAAGGGAATGCAAGATAGGACAGTAGTGGGTTCTGCTCGGTCTTTTCGGATTTCTTCAACAGCTTCACTTCCGGTCCTTAATAGGTATAACGTGAGACACGCCGGAAGTTCAGACGAGGAAAGCTCATCATCTCCATGA 2754 44.77 MMLRRKSLGFILFFILLISAPFSIKSIPITFESVIDDTASTTTISSRPRRILHQPLFPVSSTPPPYSDPEPLPPPPPPPPPPDSSSSSPPFFNEQPTGSTPDQSQPTPLNSNGTMPIPAATPPSKPTKTVAVAISVGIVTLGMLSALAFFLYRHRSKHPGETEKLVGGSNSINNSQRFPEDSRVPPSSFLYIGTVEPSQSSVVEQNGVNANANSSPYSKLKSVKRSSDRYRPSPELQPLPPLPNPPVIDSPSEISSSEEEYEESHDNTAFHTPLASSVVSYDDGFYSPPSRLRNPVHSSYSVPARIDSQFNNNNNNSNYNNITSVPHSKRTSPKSRLYVSTTKQTQPTPPPPPPPPPPQATRQQPPQSTISFSSSSPPRRPKFSSPPPPPNLALLQSISNRSGAPPPPPPPPPSLSIPGKVKPSDSNVSRLPRQFLSEPKFPVPTRPKAHSISRSGTSTSVEEPVENPNSSEKHDGEGARPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFCFNSANAATKEVTRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTREEVTESLLDEGLGPELLETLVKMAPTKEEEIKLRDYHGDVSKLGSAERFLKAILDIPFAFKRVEAMLYRANFDTEVKYLRNCFQTLEAASGELKNSRLFLALLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGVGTNENNQIKTQAKMKDDDFNKQGLQVVSGLSRDLVHVKKAAGMDSDVLSSYVSKLEIGLEKVRLVLQYAKNPDMEGKFFHSMKLFLKEAEEEMTRIKADEKKALSLVKGVTEYFHGDAAKEEAHPFRIFMIVRDFLSILDQVCNEVKGMQDRTVVGSARSFRISSTASLPVLNRYNVRHAGSSDEESSSSP 917
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10297335 10301719 + Conep09aG0141600.1 Cone9ag1375 445538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1375 917 MobiDBLite consensus disorder prediction 207 486 - -
Cone9ag1375 917 SUPERFAMILY Formin homology 2 domain (FH2 domain) 349 876 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 40 126 - -
Cone9ag1375 917 ProSiteProfiles Formin homology-2 (FH2) domain profile. 473 891 IPR015425 -
Cone9ag1375 917 SMART it6_source 473 880 IPR015425 -
Cone9ag1375 917 Gene3D Formin, FH2 domain 481 886 IPR042201 -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 88 118 - -
Cone9ag1375 917 Coils Coil 812 832 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 160 185 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 58 87 - -
Cone9ag1375 917 PANTHER FORMIN-RELATED 105 910 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone9ag1375 917 MobiDBLite consensus disorder prediction 234 248 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 166 182 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 467 486 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 450 466 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 402 418 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 292 344 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 207 221 - -
Cone9ag1375 917 Pfam Formin Homology 2 Domain 480 865 IPR015425 -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 345 363 - -
Cone9ag1375 917 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0764 Cone-Chr7:4752804 Cone9ag1375 Cone-Chr9:10297335 4.51E-150 dispersed
Cone9ag0106 Cone-Chr9:462691 Cone9ag1375 Cone-Chr9:10297335 5.19E-114 dispersed
Cone6ag1454 Cone-Chr6:11632679 Cone9ag1375 Cone-Chr9:10297335 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1375 K28090 - csv:101208011 952.199