Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1380 ATGCCAAAAGATTACGAACAAAATCGACTCACGAAGATTCGGGCAACTAAAGAGTTGAATATCAAAACAAACTGGAAAGAGCTCCTCACGGACGAACCATTTACTCGTGAAGACCTTATAACAATTCAGAATCCTAATGCTCTCGATAGTAAGGCTCTCCTAGAATTTGATAATGTAAAACATAGTCTGAAACTAGACAATGAAGAACTAAATAAATCGAGCTCAGATCCTACTCATAACATTAATGTATCGGGAGATATCAAGCAGACGCTAGAGGAGCTAGGAACAGAAAAAGGGAGGGAAACTGCAGTTCTTGGAGGAGGTGGTAGTAAAGCAAGGAAAGAAAGAGCAGCTGCACTTGACACCATATTAGCTGCAAGTATTGTAGATGCTGCATCTGCTTCAGTTCATGGAAGAAATGCAGCTGCTACAAAATCAGGCTCGAGTGATAAAACCGCTGCTCGTATAGCCAATGACATGACTGGTAAAGAGTCGATTACTACAGGTGCTACTTCCAGGTCCTTTACTTCCACATCATACGACCCCGTTACTAAAAACGACTTTGAATACATAAAAGTTGAGAAAAATCCAAAGAAGAAAGGATATGTTCAACTTCATACAACACATGGAGATTTGAATATAGAGCTGCATTGTGATATAACTCCTAGAGCATGTGAGAATTTCATAACCCTTTGTGAACGTGGATACTACAATGGAGTAGCTTTTTATAGAAGCATTCGGAATTTTATGATTCAAGGTGGTGACCCGACTGGAACGGGTAGAGGTGGAGAATCCATATGGGGAAAGCCTTTCAAAGATGAAGTCAACTCTAAGTTGCTTCACTCTGGAAGAGGAGTTGTCAGCATGGCAAATAGTGGGTCCCACACAAATGGGTCCCAGTTCTTTATCCTCTTTAAGTCAGCAAATCACTTGAACTTTAAGCATACGGTCTTTGGTGGTGTTGTGGGTGGTATGACCACTCTAGCTACAATGGAAAAAGTTCCTGTTAATGATGATGATCGACCTCTAGATGAGATTAAGATAACAAGTGTGACAGTTTTCATCAATCCTTACACCGAGCCTGATGAAGAGGAAGAGAAATATAAAGAAAAAGATGAGAAGAATGTAGCGGATGAAGAAAATGAGAAGGTTGGATCATGGTACAGTAATCCAGGTACCGGAGCAGCTGAATTAGGAGGTGGTGGTGTTGGAAAATACTTGAATCTAGTACTGCTCAGGTCGATAATACTACTTCGACAGCAATGTCTGTAA 1272 40.64 MPKDYEQNRLTKIRATKELNIKTNWKELLTDEPFTREDLITIQNPNALDSKALLEFDNVKHSLKLDNEELNKSSSDPTHNINVSGDIKQTLEELGTEKGRETAVLGGGGSKARKERAAALDTILAASIVDAASASVHGRNAAATKSGSSDKTAARIANDMTGKESITTGATSRSFTSTSYDPVTKNDFEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFITLCERGYYNGVAFYRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEVNSKLLHSGRGVVSMANSGSHTNGSQFFILFKSANHLNFKHTVFGGVVGGMTTLATMEKVPVNDDDRPLDEIKITSVTVFINPYTEPDEEEEKYKEKDEKNVADEENEKVGSWYSNPGTGAAELGGGGVGKYLNLVLLRSIILLRQQCL 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10325393 10327585 - Conep09aG0142100.1 Cone9ag1380 445543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1380 423 MobiDBLite consensus disorder prediction 360 388 - -
Cone9ag1380 423 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 194 359 IPR044666 GO:0000209(PANTHER)|GO:0061630(PANTHER)|GO:0071013(PANTHER)
Cone9ag1380 423 Gene3D - 183 367 IPR029000 -
Cone9ag1380 423 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 202 353 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 313 328 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 285 300 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 216 231 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 242 254 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 300 312 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 206 353 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Cone9ag1380 423 SUPERFAMILY Cyclophilin-like 202 364 IPR029000 -
Cone9ag1380 423 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 183 367 - -
Cone9ag1380 423 MobiDBLite consensus disorder prediction 360 381 - -
Cone9ag1380 423 CDD cyclophilin_RING 202 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0391 Cone-Chr11:1927903 Cone9ag1380 Cone-Chr9:10325393 1.20E-56 dispersed
Cone7ag1278 Cone-Chr7:9464304 Cone9ag1380 Cone-Chr9:10325393 9.77E-29 dispersed
Cone8ag1267 Cone-Chr8:10492642 Cone9ag1380 Cone-Chr9:10325393 4.87E-31 dispersed
Cone6ag1459 Cone-Chr6:11655955 Cone9ag1380 Cone-Chr9:10325393 9.29E-241 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1380 K10598 - gmx:100819923 600.127