Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag1384 | ATGGAGAGGTTTCTGGATGAGGATTTTACAGCGGTGAAGCCGAAGCATTCATCAGAGGAAGGGTTGCAGAATTGGAGGAAGCTATGTGGAATCGTCAAGAACAAAAAACGCAGGTTCCGTTTCACTGCTAATCTTTCCAAACGTATGGAAGCTGCTACCATGCGCCAGAACAACCAGGAGAAGTTGAGGGTTGCTGTCCTGGTCTCAAAAGCTGCAATCCAATTTATCCAAGGTGTCCGAATAAGCGACTATGTTGTCCCAGAGCCAGTTAAAGGTGCAGGTTTTCAAATCTGTGCTGATGAACTTGGCTCAATTGTAGAAAGCCACGATCAAAAGAAGCTCAAATTCCATGGTGGGGTCCATGGCATAGCAGAAAAGCTCTCCACATCTACAACAAAAGGGCTTGGTACTGATGATATCTATGCACTGAATCGTAGGGAAGAAATCTACGGAGCCAATAAATTCACTGAAAGTGAAACTGAGAGTTTCTTGGTATTTGTTTGGGAAGCCCTTCAAGACATGACTCTAATGATTCTAGGATTCTGTGCCTTTGTTTCTCTGATTGTCGGAATCATAACAGAAGGCTGGCCCCAGGGGTCCCACGATGGGCTCGGGATTGTTGCCAGCATCTTGCTGGTTGTGTTTGTAACGGCAACTAGTGATTATAGGCAGTCCTTACAGTTCAAGGATTTGGACAAGGAGAAGAAGAAGATCTCTGTTCAGGTCACAAGAAATGGATATAGGCAGAAATTATCTGTTTATGATTTACTCCCAGGAGATATTGTTCATCTCTTTATAGGAGACCAAGTGCCTGCAGATGGGCTATTTGTTTCGGGATTTTCGGTGTTAATAGATGAGTCAAGTTTAACGGGAGAAAGCGAGCCGGTAATGGCAACTGCTGAAAACCCTTTTCTTCTTTCGGGAACTAAAGTTCAAGATGGGTCATGTTTGATGTTAGTCACTACAGTTGGGATGAGAACCCAATGGGGTAAATTAATGGCTACTCTAAGTGAAGGCGGGGTGGATGAAACTCCATTACAAGTGAAACTAAACGGAGTAGCAACTATTATAGGAAAAATAGGTCTTTTCTTCGCAGTAGTCACTTTTGCCGTTTTGGTTCAAGGGCTACTTTGGCGGAAAATCAATGACAGGACCCACTGGAGTTGGTCTGGAGATGATGCAATGGCGATGTTGGAGTACTTTGCCATTGCTGTTACAATTGTTGTGGTTGCTGTTCCAGAAGGTCTTCCATTAGCTGTTACATTAAGTCTTGCCTTTGCCATGAAGAAGATGATGAATGATAAAGCTCTTGTTCGCCATCTTGCAGCTTGTGAAACTATGGGGTCCGCCACAAGTATTTGCAGTGATAAAACGGGAACGCTCACTACAAATCACATGACAGTAGTTAAATCATGCATTGGCATGATTGTCAAGGAAGTGGATAATAAACCCAATAATAACTCTTGTTCTGATTTATTCTCTGACTTACCTGATTCTACTCGGCAGCTTTTTCTCCAGTCAATTTTTAACAACACGGGAGGAGAAGTAGTTGTAAACAAAGATGGTAAGCTCGAGATATTAGGTACACCTACTGAAACTGCTTTGCTAGAGTTTGGGCTTGCAGTTGGAGGAGACTTTCAGGCCGAGAGAAAAGTGGTTCAGATGGTTAGAGTAGAGCCATTTAACTCTTCAAAAAAACGTATGGGGGTAGTGATAAAATTATCCGGAGGTAATAGTCGGGCTCACACTAAAGGTGCTTCTGAAATTATACTGGCCGATTGTGAGAAGGTAGTTAATTCAAAGGGTGAGATTGTTCCCTTAGATGACTTGTCCATGAGCCATTTAACTGAGACGATTAATCAATTTGCTAGTGAAGCTCTGCGGACTCTATGCCTTGCTTATATGGAGCTTGAAGGTGGATTCTCTGCTGATAAACCGATTCCGGTTTCTGGGTATACCTGTATAGGGATTGTTGGTATTAAAGATCCTGTTCGCCCAGGTGTCAAGGAATCTGTTGCAATTTGTCGTTCAGCTGGTATCACGGTCCGAATGGTTACGGGTGATAATATCATTACAGCTAAGGCCATTGCTAGAGAATGTGGGATTCTTACCGATGACGGTATAGCCATTGAGGGGCCTGATTTCAGGGAGAAAAATCAGGAACAGATGCTTGAACTTATTCCGAAAATTCAGGTGATGGCTCGATCTTCACCACTTGATAAGCATGTAATGGTGAAGCAATTAAGGACCACATTTGATGAGGTGGTTGCTGTGACTGGAGATGGAACAAACGATGCTCCGGCTCTTCACGAAGCTGATATTGGACTGGCAATGGGAATTGCCGGAACAGAGGTTGCTAAAGAGAGTGCTGATGTCATCATTTTGGATGATAATTTCTCTACTATAGTAACAGTAGGGAGATGGGGCCGGTCGGTCTACGTGAACATTCAAAAATTCGTACAGTTCCAGCTCACTGTTAACATCGTTGCTCTCATTATCAACTTCTCTTCAGCTTGTTTCACAGGGAAGGCTCCTCTTACAGCAGTCCAGCTTTTGTGGGTCAACATGATAATGGACACTCTAGGTGCATTAGCTCTTGCTACCGAGCCTCCAAATGACAGCTTAATGAAACGTCCCCCTGTTGGAAGAAGAGGAAACTTTATCAGTAAAGTCATGTGGAGGAACATCTTAGGCCAATCCTTGTACCAGTTACTGGTTCTATGGCTTCTTCAAGTGAAAGGAAAAAGGATTTTTGGTCTCGAGGGCCCAGATTCCGATCTTGTCCTCAATACACTTGTTTTCAACTCATTCGTGTTTTGTCAGCTTTTCAATGAGATAAACTCCCGGGAAATGGAGAAAATCAATGTCTTCGCAGGTATTCTTGGCAATTATGTGTTTGCGAGCGTAGTCGGTGCAACTCTGTTCTTTCAGATCATAATTGTTGAGTGTTTGGGAACTTTTGCTAACACTACGCCGTTGACTCTTACTCAATGGTATGTTAGTGTGTTCATTGGGTTTATAGGGATGCCTATTGCTGCTTGGTTAAAGACAGTCCAGGTATAA | 3063 | 43.19 | MERFLDEDFTAVKPKHSSEEGLQNWRKLCGIVKNKKRRFRFTANLSKRMEAATMRQNNQEKLRVAVLVSKAAIQFIQGVRISDYVVPEPVKGAGFQICADELGSIVESHDQKKLKFHGGVHGIAEKLSTSTTKGLGTDDIYALNRREEIYGANKFTESETESFLVFVWEALQDMTLMILGFCAFVSLIVGIITEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISVQVTRNGYRQKLSVYDLLPGDIVHLFIGDQVPADGLFVSGFSVLIDESSLTGESEPVMATAENPFLLSGTKVQDGSCLMLVTTVGMRTQWGKLMATLSEGGVDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLLWRKINDRTHWSWSGDDAMAMLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKSCIGMIVKEVDNKPNNNSCSDLFSDLPDSTRQLFLQSIFNNTGGEVVVNKDGKLEILGTPTETALLEFGLAVGGDFQAERKVVQMVRVEPFNSSKKRMGVVIKLSGGNSRAHTKGASEIILADCEKVVNSKGEIVPLDDLSMSHLTETINQFASEALRTLCLAYMELEGGFSADKPIPVSGYTCIGIVGIKDPVRPGVKESVAICRSAGITVRMVTGDNIITAKAIARECGILTDDGIAIEGPDFREKNQEQMLELIPKIQVMARSSPLDKHVMVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGRWGRSVYVNIQKFVQFQLTVNIVALIINFSSACFTGKAPLTAVQLLWVNMIMDTLGALALATEPPNDSLMKRPPVGRRGNFISKVMWRNILGQSLYQLLVLWLLQVKGKRIFGLEGPDSDLVLNTLVFNSFVFCQLFNEINSREMEKINVFAGILGNYVFASVVGATLFFQIIIVECLGTFANTTPLTLTQWYVSVFIGFIGMPIAAWLKTVQV | 1020 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 10346429 | 10350825 | + | Conep09aG0142500.1 | Cone9ag1384 | 445547 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag1384 | 1020 | SUPERFAMILY | HAD-like | 453 | 864 | IPR036412 | - | |
| Cone9ag1384 | 1020 | Pfam | E1-E2 ATPase | 237 | 433 | - | - | |
| Cone9ag1384 | 1020 | SFLD | p-type atpase | 436 | 811 | IPR044492 | - | |
| Cone9ag1384 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 759 | 778 | - | - | |
| Cone9ag1384 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 454 | 468 | - | - | |
| Cone9ag1384 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 656 | 667 | - | - | |
| Cone9ag1384 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 678 | 688 | - | - | |
| Cone9ag1384 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 783 | 795 | - | - | |
| Cone9ag1384 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 285 | 299 | - | - | |
| Cone9ag1384 | 1020 | Pfam | Cation transporting ATPase, C-terminus | 844 | 1017 | IPR006068 | - | |
| Cone9ag1384 | 1020 | CDD | P-type_ATPase_Ca_PMCA-like | 143 | 892 | - | - | |
| Cone9ag1384 | 1020 | PANTHER | CATION TRANSPORTING ATPASE | 74 | 1019 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cone9ag1384 | 1020 | FunFam | Calcium-transporting ATPase | 652 | 804 | - | - | |
| Cone9ag1384 | 1020 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 108 | 1018 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone9ag1384 | 1020 | Gene3D | - | 169 | 1016 | - | - | |
| Cone9ag1384 | 1020 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 456 | 462 | IPR018303 | - | |
| Cone9ag1384 | 1020 | SUPERFAMILY | Calcium ATPase, transduction domain A | 239 | 334 | IPR008250 | - | |
| Cone9ag1384 | 1020 | Gene3D | - | 17 | 77 | - | - | |
| Cone9ag1384 | 1020 | FunFam | Calcium-transporting ATPase | 776 | 1020 | - | - | |
| Cone9ag1384 | 1020 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 117 | 1018 | IPR023298 | - | |
| Cone9ag1384 | 1020 | Pfam | Cation transport ATPase (P-type) | 519 | 597 | - | - | |
| Cone9ag1384 | 1020 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 460 | 668 | IPR023299 | GO:0000166(InterPro) | |
| Cone9ag1384 | 1020 | Gene3D | - | 464 | 663 | IPR023299 | GO:0000166(InterPro) | |
| Cone9ag1384 | 1020 | FunFam | Calcium-transporting ATPase | 464 | 663 | - | - | |
| Cone9ag1384 | 1020 | PRINTS | H+-transporting ATPase (proton pump) signature | 759 | 775 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone9ag1384 | 1020 | PRINTS | H+-transporting ATPase (proton pump) signature | 791 | 816 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone9ag1384 | 1020 | PRINTS | H+-transporting ATPase (proton pump) signature | 615 | 633 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone9ag1384 | 1020 | SMART | Cation_ATPase_N_a_2 | 119 | 191 | IPR004014 | - | |
| Cone9ag1384 | 1020 | Gene3D | - | 451 | 804 | IPR023214 | - | |
| Cone9ag1384 | 1020 | Gene3D | - | 144 | 337 | - | - | |
| Cone9ag1384 | 1020 | FunFam | Calcium-transporting ATPase | 17 | 77 | - | - | |
| Cone9ag1384 | 1020 | NCBIfam | HAD-IC family P-type ATPase | 729 | 841 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone9ag1384 | 1020 | NCBIfam | HAD-IC family P-type ATPase | 206 | 483 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone9ag1384 | 1020 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 186 | IPR004014 | - | |
| Cone9ag1384 | 1020 | SFLD | C1.7: P-type atpase like | 436 | 811 | - | - | |
| Cone9ag1384 | 1020 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 50 | IPR024750 | GO:0005516(InterPro) | |
| Cone9ag1384 | 1020 | FunFam | Calcium-transporting ATPase | 217 | 337 | - | - | |
| Cone9ag1384 | 1020 | Pfam | haloacid dehalogenase-like hydrolase | 653 | 773 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone7ag0285 | Cone-Chr7:1209868 | Cone9ag1384 | Cone-Chr9:10346429 | 3.85E-257 | dispersed | |
| Cone9ag0775 | Cone-Chr9:3710036 | Cone9ag1384 | Cone-Chr9:10346429 | 5.50E-17 | dispersed | |
| Cone4ag1612 | Cone-Chr4:12258704 | Cone9ag1384 | Cone-Chr9:10346429 | 0 | wgd | |
| Cone6ag1463 | Cone-Chr6:11673578 | Cone9ag1384 | Cone-Chr9:10346429 | 0 | wgd | |
| Cone7ag1339 | Cone-Chr7:9747578 | Cone9ag1384 | Cone-Chr9:10346429 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag1384 | K01537 | - | csv:101212315 | 1632.85 |