Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1418 ATGCGCCACCTCCTCTTTCCTCCTCTCCTCCTCCTCCTCCTCCTGCACCTCCACGTCTTCTGTTCCTCCTCCGCTGCCGTTCCAGAATACAGAGCTCTTCTCTCACTCAGAACTTCCATCACCGACGACCCCCAATCATCACTCGCCTCGTGGAACGCGTCCACCAGCCATTGCACATGGGCTGGCATCACGTGCGACTATCGCCAGCACGTGACCGGCATCGACCTCTCCGGTCTGACTCTCTCCGGCTCTCTCTCTCCTGACATAGCTCACCTCCGTTTCCTCACGAATCTCTCCCTCGCTGCCAACCAGTTCTCCGGCCCAATCCCTCCGGAGATCTCCTTCGTCTTGACGCTCCGGTACCTCAACCTGTCCAACAATGTCTTCAACGGCACTTTCCCGGCCGAGCTATGGCGGCTCAAAAATCTTCAAGTCCTGGATTTATACAACAACAACATGTCCGGTTTCTTACCCCTTGTCGTCACTCAAATGCCGAACCTCCTACATTTACATCTTGGCGGGAACTTCTTCTCCGGCCAGATCCCGCCGGAGTATGGAAAATGGCAGTTTCTCGAGTATTTAGCAGTTTCCGGCAACGCGCTCGAAGGTCAAATCCCGCCGGCGATTGGATACTTAACAAAACTCCGGGAACTCTACGTTGGATACTTCAACAACTACGTAGGAGGCATTCCTCGCGAGATCGGAAACTTGTCGGAGCTTGTCAGGCTCGACGCAGCGAACTGCGGTTTAACCGGAGAAATTCCGGCGGAGATCGGAAATCTGCAGAAACTCGATACTCTGTTTCTTCAAGTCAATGCTTTATCGGGACCTCTAACTTCCGAGCTCGGAAGCTTAAAGAGCTTGAAATCCATGGATTTATCGAACAACATGTTCACCGGCGAGATTCCGACGTCCTTTTCCGACCTCAACAACTTAACTCTACTGAACCTCTTCAGGAATAAGCTTCACGGCGCTATTCCTGACTTCATCGGAGAATTGCCGGCTTTAGAGGTTCTCCAGCTGTGGGAAAACAACTTCACCGGCTCTATACCTCAAAACCTAGGCAAAAACGGAAAGCTCCAGATTCTAGACCTTTCTTCTAACAAACTGACCGGAACCCTCCCACCCGACATGTGCTCAGGCAACCACCTCCAAACCCTAATCACTCTTGGAAACTTCCTGTTCGGTCCGATCCCGGATTCGCTAGGAAAATGCAAGTCCTTGAGCCGAATCAGAATGGGAGAAAACTTCCTCAATGGGTCCATTCCGAAAGGTCTTTTCGGTTTACCGAAACTTACTCAAGTCGAATTGCAAGACAACTACTTAGCTGGGCAGTTTCCAGTTACTGACTCAATCTCGGTCAATCTCGGGCAGATCAGTTTGTCCAACAACCGCCTTTCCGGGCCATTACCAGCTTCAATCGGAAACTTTTCTGGGGTCCAGAAGCTTCTAGTAGACGGAAACAAGTTCTCGGGTCAAATTCCACCTGAAATCGGCCTACTACAACAACTCTCCAAGATTGACTTTAGCCATAATAAATTTTCCGGCCAAATCACCTCGGAATTAAGCCAATGTAAGCTCTTAACTTTTGTTGATCTTAGTCGGAACGAGCTAGTAGGGGAGATTCCAAATGAGATAACCACCATGAGAATATTAAACTATCTAAATCTTTCGAGAAACCATTTAGTTGGAACCATTCCTAGTTCTATATCATCAATGCAAAGCTTAACCTCTGTAGATTTTTCTTACAATAATCTTTCCGGTTTAGTCTCCGGAGCGGGTCAATTCAGTTACTTCAACTACACGTCATTTCTCGGAAACCCGAATCTTTGTGGCCCGTATTTAGGCCTGTGTAAAAATGGGGTTGCAAATAGTACACATCAAGCCCATGTTAAAGGCCCTCTTTCAGCTTCTTTAAAGCTCCTTCTAGTCACAGTACTATTAGTATGCTCCATTGCATTTGCTGTAGCGGCAATTATAAAAGCCCGGTCTTTAAAACGAGCAAGTGAAGCTCGAGCTTGGAAATTAACGGCCTTTCAACGGCTAGATTTTACAGCCGATGATGTGTTAGATTGCTTGAAAGAAGATAACATTATAGGCAAAGGTGGGGCTGGGATTGTTTATAAAGGGGTAATGCCAAACGGAGACAATGTTGCTGTTAAAAGGTTGCCTGCTATGAGCAGGGGATCATCTCATGACCATGGATTCAATGCAGAGATTCAAACCCTAGGGAGGATTAGGCATAGACATATTGTTAGATTGCTCGGGTTTTGTTCGAATCATGAGACAAATCTTTTAGTTTATGAGTACATGCCTAATGGGAGCTTGGGTGAGGTTCTTCATGGGAAGAAAGGAGGGCATTTGCTTTGGGACACTAGGTATAAGATTGCTATCGAGGCTGCTAAGGGTCTTTGTTATCTTCATCATGATTGCTCGCCTTTGATTGTTCACAGAGACGTTAAATCGAACAATATTTTGTTGGACTCAAATTTTGAGGCCCATGTTGCTGATTTCGGGCTGGCTAAATTTCTTCAAGATTCCGGCACTTCGGAATGCATGTCTGCTATTGCCGGTTCTTATGGTTATATCGCCCCAGAGTATGCTTATACTTTGAAGGTGGATGAGAAGAGTGATGTATACAGTTTTGGAGTAGTTTTGTTAGAGCTAGTAACGGGCCGAAAACCAGTCGGAGAATTTGGGGACGGAGTGGACATAGTTCAGTGGGTCCGAAAAATGACGGACTCAAACAAGGAAGGTGTCTTGAAAGTAATCGATCCGAGACTCTCCTCTGTCCCACTTAATGAAGTAATGCATGTGTTCTATGTTGCTCTGCTCTGCGTTGAAGAACAAGCCGTAGAGCGGCCCACAATGCGGGAAGTCATCCAAATTTTGACTGAAATGCCAAAACCGCCCGCAAGCTCGAAAGTGATGTATCAACTTTCTGCAGCAACCGATGCCTCTCTGCCGCCACCTTCCGCTACAGCCACAACCACCGCTTTAGAATCTCAGCCACAGTCTCCGTCTACTGATCTGCTTAGTATTTGA 3045 47.13 MRHLLFPPLLLLLLLHLHVFCSSSAAVPEYRALLSLRTSITDDPQSSLASWNASTSHCTWAGITCDYRQHVTGIDLSGLTLSGSLSPDIAHLRFLTNLSLAANQFSGPIPPEISFVLTLRYLNLSNNVFNGTFPAELWRLKNLQVLDLYNNNMSGFLPLVVTQMPNLLHLHLGGNFFSGQIPPEYGKWQFLEYLAVSGNALEGQIPPAIGYLTKLRELYVGYFNNYVGGIPREIGNLSELVRLDAANCGLTGEIPAEIGNLQKLDTLFLQVNALSGPLTSELGSLKSLKSMDLSNNMFTGEIPTSFSDLNNLTLLNLFRNKLHGAIPDFIGELPALEVLQLWENNFTGSIPQNLGKNGKLQILDLSSNKLTGTLPPDMCSGNHLQTLITLGNFLFGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLAGQFPVTDSISVNLGQISLSNNRLSGPLPASIGNFSGVQKLLVDGNKFSGQIPPEIGLLQQLSKIDFSHNKFSGQITSELSQCKLLTFVDLSRNELVGEIPNEITTMRILNYLNLSRNHLVGTIPSSISSMQSLTSVDFSYNNLSGLVSGAGQFSYFNYTSFLGNPNLCGPYLGLCKNGVANSTHQAHVKGPLSASLKLLLVTVLLVCSIAFAVAAIIKARSLKRASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGVMPNGDNVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLLWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVIDPRLSSVPLNEVMHVFYVALLCVEEQAVERPTMREVIQILTEMPKPPASSKVMYQLSAATDASLPPPSATATTTALESQPQSPSTDLLSI 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10516382 10519971 - Conep09aG0145900.1 Cone9ag1418 445581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1418 1014 Gene3D Ribonuclease Inhibitor 27 180 IPR032675 -
Cone9ag1418 1014 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Cone9ag1418 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 662 770 - -
Cone9ag1418 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 337 622 - -
Cone9ag1418 1014 SMART serkin_6 693 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1418 1014 SUPERFAMILY RNI-like 74 394 - -
Cone9ag1418 1014 SUPERFAMILY L domain-like 360 615 - -
Cone9ag1418 1014 SUPERFAMILY Protein kinase-like (PK-like) 689 964 IPR011009 -
Cone9ag1418 1014 Gene3D Ribonuclease Inhibitor 277 375 IPR032675 -
Cone9ag1418 1014 MobiDBLite consensus disorder prediction 985 1014 - -
Cone9ag1418 1014 Gene3D Phosphorylase Kinase; domain 1 661 770 - -
Cone9ag1418 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 771 980 - -
Cone9ag1418 1014 ProSiteProfiles Protein kinase domain profile. 693 967 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1418 1014 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 966 IPR050647 -
Cone9ag1418 1014 Pfam Leucine Rich Repeat 142 160 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 336 356 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 359 379 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 455 477 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 240 261 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 119 140 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 552 573 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Pfam Leucine Rich Repeat 287 309 IPR001611 GO:0005515(InterPro)
Cone9ag1418 1014 Gene3D Transferase(Phosphotransferase) domain 1 771 982 - -
Cone9ag1418 1014 Pfam Protein kinase domain 695 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1418 1014 Gene3D Ribonuclease Inhibitor 181 276 IPR032675 -
Cone9ag1418 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 86 329 - -
Cone9ag1418 1014 SMART LRR_typ_2 333 357 IPR003591 -
Cone9ag1418 1014 SMART LRR_typ_2 285 308 IPR003591 -
Cone9ag1418 1014 SMART LRR_typ_2 573 596 IPR003591 -
Cone9ag1418 1014 SMART LRR_typ_2 501 525 IPR003591 -
Cone9ag1418 1014 SMART LRR_typ_2 164 188 IPR003591 -
Cone9ag1418 1014 SMART LRR_typ_2 140 163 IPR003591 -
Cone9ag1418 1014 SMART LRR_typ_2 358 381 IPR003591 -
Cone9ag1418 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1418 1014 Gene3D Ribonuclease Inhibitor 376 619 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0575 Cone-Chr5:2489788 Cone9ag1418 Cone-Chr9:10516382 3.42E-82 dispersed
Cone6ag0989 Cone-Chr6:5425703 Cone9ag1418 Cone-Chr9:10516382 1.27E-97 dispersed
Cone6ag1494 Cone-Chr6:11836339 Cone9ag1418 Cone-Chr9:10516382 5.23E-282 dispersed
Cone7ag0369 Cone-Chr7:1606393 Cone9ag1418 Cone-Chr9:10516382 1.21E-79 dispersed
Cone7ag1472 Cone-Chr7:10357304 Cone9ag1418 Cone-Chr9:10516382 1.67E-93 dispersed
Cone9ag0880 Cone-Chr9:4293527 Cone9ag1418 Cone-Chr9:10516382 1.14E-70 dispersed
Cone9ag0992 Cone-Chr9:5100982 Cone9ag1418 Cone-Chr9:10516382 1.27E-98 dispersed
Cone9ag1093 Cone-Chr9:6785848 Cone9ag1418 Cone-Chr9:10516382 3.96E-69 dispersed
Cone9ag1416 Cone-Chr9:10501865 Cone9ag1418 Cone-Chr9:10516382 4.92E-76 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83217 PF19160 SPARK 4.90E-21 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1418 - - - 0.0