Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag1422 | ATGGATCTGAATGCCGAATGGTTTGTTGAAATGGGATTGATGGATCAAGATCATGCATTTGCTCAAGCATACTTGATGAACTCACTCGACCATGCTCAGCTCGATGATCAGTTCAATATTCACACCCTTAATCCTTCTGATCAGTGTCAAAGCTACTCTCAGATCAATCCCAAAGCGGCAACGTATCATCACCATTATCACAATAATAATAATACCCTAATTAGTGCTTCATCTTCCATTAATGAAATTACACATTGTCTAACACTGGTTGATCAAGACGCTCGAAGGCCAGAAAAGCAGCAGAAGATCTACGGCCGGAATTCTCATATGGAAGCTTCTGCTAACTCTTCTTTAACTTCTCCCAAGATTATTTCATTCGAAAACTTTCATACTACTACTGTGAAGCCTAAGACTGAGGTAGTGGTGGGGTCAGATGGAATCTGCATCAATTTCCCAACGGATGTTATTGATGCTTATAGTAATTCGGATCATTGTCAAACCTCTAAGCAATATTGTCAAGGATTTCATAACAGGTCACTAGTAATGAGTAGAACTAATTTACATGCTCAAGATCACGTGATCGCTGAGAGGAAACGTAGGGGGAAGCTTAACCAGAGGTTTATTGCCCTCTCAGCCCTTCTTCCCGGCTTAAAAAAGATGGACAAGGCTTCAGTTCTTGGGGACGCAGTAAAGTACGTGAAGCAACTTCAGGAGCATCAGAAAGTCCTAGAAGAACAGGCAGCAAATAAAACAGCTGAATCAGTAATTTATTTGAAAAGAACCCATTTATCTAATGATCTTGATGATCATCATGACATGACTACTTGTTCATCCGGTGAAGATTCTAGTAGCTTGTCAGACCAAAGTCCACTCCCTCAAATTGACGCAAGAGTTTCAGACAAGGATGTTCTTGTAAGAATTCATTGTGAGAAACACAAAGGATGTCTAGCAAACATTCTTAATGAGATGGAGAAGCTTCAGTTGACCATCATCAATAGCACTGTCTTGCCCTTTGGATGTTCTACCCTCGATATAACAGTTGTCGCTAAGGTGAAAATTTCACTATACAATTAA | 1074 | 40.04 | MDLNAEWFVEMGLMDQDHAFAQAYLMNSLDHAQLDDQFNIHTLNPSDQCQSYSQINPKAATYHHHYHNNNNTLISASSSINEITHCLTLVDQDARRPEKQQKIYGRNSHMEASANSSLTSPKIISFENFHTTTVKPKTEVVVGSDGICINFPTDVIDAYSNSDHCQTSKQYCQGFHNRSLVMSRTNLHAQDHVIAERKRRGKLNQRFIALSALLPGLKKMDKASVLGDAVKYVKQLQEHQKVLEEQAANKTAESVIYLKRTHLSNDLDDHHDMTTCSSGEDSSSLSDQSPLPQIDARVSDKDVLVRIHCEKHKGCLANILNEMEKLQLTIINSTVLPFGCSTLDITVVAKVKISLYN | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10561808 | 10563113 | - | Conep09aG0146500.1 | Cone9ag1422 | 445585 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag1422 | 357 | Pfam | Helix-loop-helix DNA-binding domain | 192 | 237 | IPR011598 | GO:0046983(InterPro) | |
Cone9ag1422 | 357 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 192 | 253 | IPR036638 | GO:0046983(InterPro) | |
Cone9ag1422 | 357 | CDD | bHLH_AtNAI1_like | 188 | 260 | - | - | |
Cone9ag1422 | 357 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 187 | 236 | IPR011598 | GO:0046983(InterPro) | |
Cone9ag1422 | 357 | SMART | finulus | 193 | 242 | IPR011598 | GO:0046983(InterPro) | |
Cone9ag1422 | 357 | Coils | Coil | 233 | 253 | - | - | |
Cone9ag1422 | 357 | Gene3D | - | 184 | 249 | IPR036638 | GO:0046983(InterPro) | |
Cone9ag1422 | 357 | MobiDBLite | consensus disorder prediction | 269 | 291 | - | - | |
Cone9ag1422 | 357 | PANTHER | BHLH TRANSCRIPTION FACTOR | 14 | 352 | IPR052610 | - | |
Cone9ag1422 | 357 | MobiDBLite | consensus disorder prediction | 277 | 291 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag1496 | Cone-Chr6:11857675 | Cone9ag1422 | Cone-Chr9:10561808 | 3.11E-173 | dispersed | |
Cone9ag1419 | Cone-Chr9:10528658 | Cone9ag1422 | Cone-Chr9:10561808 | 3.77E-74 | dispersed | |
Cone9ag1420 | Cone-Chr9:10535519 | Cone9ag1422 | Cone-Chr9:10561808 | 3.42E-145 | dispersed | |
Cone9ag1422 | Cone-Chr9:10561808 | Cone6ag0259 | Cone-Chr6:1190014 | 2.76E-06 | dispersed | |
Cone9ag1422 | Cone-Chr9:10561808 | Cone9ag1430 | Cone-Chr9:10624747 | 9.41E-07 | proximal | |
Cone9ag1421 | Cone-Chr9:10555416 | Cone9ag1422 | Cone-Chr9:10561808 | 1.40E-28 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46903 | PF08323 | Glyco_transf_5 | 1.20E-47 | CL0113 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag1422 | - | - | - | 0.0 |