Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1434 ATGGCTATCTTCTTTCTGCTACTAATTATCCTTCTCACAACTCCAGCTGATTATGCCCTTTACTTCAAAGCACCTCCCTTTAACACAACAAGCATAATCTTTGAAGGTGATGCAGCACCTTCTACTTTAGGCGTCGAGTTCATAGATTATAGGTACACATGTCGTGTTGGTCGAGCCAGCCTGACCGAAAGGGTGCATCTATGGGACTCGAGAACTGGAAACCTTTCGGATTTCTCGAGTCATTTTTCTTTCACCATTGATACCCTTAAACTCCCTTACAATGTTTCCGGAGCAGGATTTGCATTTTTCTTAGCTCCTTTCGGGTTTCAAATCCCACTGAATTCCGATAGTGGTTTTCTGGGCTTATTCAATAAAACAATGGGAGATCAGATTGTTGTAGTTGAGTTTGACACTTTTGTAAACTTAGACTGGGATCCTCCATTTCAGCACGTGGGGATTAACAACAACTCCATTAGGTCTGCAGTTACCACACCATGGAATGGTACCTTTCATAGTGGTGATACCGTTGATGTACGGATTGCATACAGTGCTACCACTAAAAACTTTAGTGTTTTATGGGACCACCAAACCACTTCTAATCCTCTAGAGAAAAACTTCCTTTCTTACATAATAGATTTGTCCAAGGTTCTACCCGAATGGATCATGGTCGGATTCTCTGCAGCTACGGGCGCCTACCCAGAGAGCAATTTCCTTCGATCGTGGGAGTTTAGTTCGAGTTTGGACATTTCTGACCACACAGATAGAAAAGAAACAGGAACAAAAAGATTATTAGTTGGTTCATTAGTTTCGGTAAGTACTCTATTTGTGGGAATATTGATAATTTCTAGAATCTTATGGAGGAAGAAGCAATTGGCAAAGCAAATTGCAGAAAAGGCAAAATTGCTGTCCATGAACAATGATCTTGAGAAAGGGACAGGACCGAGAAGGTATTCTCATAAAGATCTTATCGCGGCTACTAAGAATTTCTCAAACGAAAGGAAGTTAGGTGAAGGCGGGTTCGGTTCTGTTTACAAAGGTTACATTGTTGATCAAGATCTATTAGTTGCGGTGAAGAAATTTTCCAAGGGTTCCTCACAAGGGAAAAAGGAATACACAACGGAAGTAAAGATCATTAGCCAGTTGAGGCATCGAAATTTGGTGCAACTCCTCGGTTGGTGTCACGAAGAAGGTGAGCTACTACTAGTTTATGAGTTCATGCCGAATGGTAGTCTCGATTCTCATCTTTTCGGCAAGAAGACTTCCCTCACGTGGGCTTTGCGACATAAAATTGCTCTTGGGCTCGCCTCGGCATTGCTTTATCTTCATGAAGAGTGGGAACAATGCGTCGTACATCGAGATATCAAATCAAGCAATATCATGCTCGATGCAAACTTCAATCTCAAGCTCGGTGACTTTGGGTTAGCTCGGCTTTTGGACCATGAGCTACCTCCAAAGACAACGGGGTTGGCCGGAACTTTTGGTTATATGGCCCCAGAGTATATAGGCACAGGTCGAGCAAGTAAAGAGTCGGATGTTTATAGCTTTGGTGTGGTTGCGTTGGAAATTGCAACCGGGAAAAAGGCAGTAGATCCTGCAGAGAAAAAATCTTTGGTGCAGTGGGTTTGGGATTTATATGGAGGGGGAGAAGTTGATAAAGCTGTTGATGAGAGATTGGAACATGATATGATAAGTATCGATGATAAGAGGCAAATGGAGTGTTTGATCATCGTGGGGCTATGGTGTGCTCATCCCGATTGCCGATTGAGACCTTCAATAAGGCAAGCGATCCAAGTTCTTCATTTCGAGGCCAATTTGCCAAGTCTTGATTCGAAAATGCCGGTTCTCACCTTCCATGTGCCTGATCCAAATTATGCTAGTAGCTCTCTTTCCTCATCAGCCACTTAA 1905 42.83 MAIFFLLLIILLTTPADYALYFKAPPFNTTSIIFEGDAAPSTLGVEFIDYRYTCRVGRASLTERVHLWDSRTGNLSDFSSHFSFTIDTLKLPYNVSGAGFAFFLAPFGFQIPLNSDSGFLGLFNKTMGDQIVVVEFDTFVNLDWDPPFQHVGINNNSIRSAVTTPWNGTFHSGDTVDVRIAYSATTKNFSVLWDHQTTSNPLEKNFLSYIIDLSKVLPEWIMVGFSAATGAYPESNFLRSWEFSSSLDISDHTDRKETGTKRLLVGSLVSVSTLFVGILIISRILWRKKQLAKQIAEKAKLLSMNNDLEKGTGPRRYSHKDLIAATKNFSNERKLGEGGFGSVYKGYIVDQDLLVAVKKFSKGSSQGKKEYTTEVKIISQLRHRNLVQLLGWCHEEGELLLVYEFMPNGSLDSHLFGKKTSLTWALRHKIALGLASALLYLHEEWEQCVVHRDIKSSNIMLDANFNLKLGDFGLARLLDHELPPKTTGLAGTFGYMAPEYIGTGRASKESDVYSFGVVALEIATGKKAVDPAEKKSLVQWVWDLYGGGEVDKAVDERLEHDMISIDDKRQMECLIIVGLWCAHPDCRLRPSIRQAIQVLHFEANLPSLDSKMPVLTFHVPDPNYASSSLSSSAT 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10665161 10667065 + Conep09aG0147700.1 Cone9ag1434 445597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1434 634 ProSitePatterns Protein kinases ATP-binding region signature. 335 359 IPR017441 GO:0005524(InterPro)
Cone9ag1434 634 FunFam L-type lectin-domain containing receptor kinase IX.1 314 405 - -
Cone9ag1434 634 CDD STKc_IRAK 335 599 - -
Cone9ag1434 634 ProSiteProfiles Protein kinase domain profile. 329 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1434 634 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 250 IPR013320 -
Cone9ag1434 634 Gene3D Phosphorylase Kinase; domain 1 314 405 - -
Cone9ag1434 634 Pfam Protein kinase domain 330 597 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1434 634 Gene3D Transferase(Phosphotransferase) domain 1 406 620 - -
Cone9ag1434 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1434 634 FunFam Lectin-domain containing receptor kinase A4.3 406 619 - -
Cone9ag1434 634 PANTHER - 49 607 IPR050528 GO:0005886(PANTHER)
Cone9ag1434 634 SUPERFAMILY Protein kinase-like (PK-like) 314 627 IPR011009 -
Cone9ag1434 634 CDD lectin_legume_LecRK_Arcelin_ConA 20 247 IPR001220 GO:0030246(InterPro)
Cone9ag1434 634 Gene3D - 19 265 - -
Cone9ag1434 634 SMART serkin_6 329 599 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1434 634 Pfam Legume lectin domain 22 257 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag1434 Cone-Chr9:10665161 Cone10ag1425 Cone-Chr10:11022006 1.15E-70 dispersed
Cone9ag1434 Cone-Chr9:10665161 Cone9ag1435 Cone-Chr9:10668309 7.66E-244 tandem
Cone12ag0205 Cone-Chr12:1045788 Cone9ag1434 Cone-Chr9:10665161 3.69E-255 wgd
Cone12ag1006 Cone-Chr12:8523023 Cone9ag1434 Cone-Chr9:10665161 4.81E-16 wgd
Cone3ag1076 Cone-Chr3:29405308 Cone9ag1434 Cone-Chr9:10665161 1.23E-174 wgd
Cone6ag1511 Cone-Chr6:11942173 Cone9ag1434 Cone-Chr9:10665161 2.72E-261 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83218 PF13041 PPR_2 8.90E-08 CL0020 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1434 - - - 0.0