Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1435 ATGTCTTCCTCTCTCTTTATCAACTTACTTCTCTTCACTATTTCTCTTTTCTTCCTCCCCTTTACTTGTTCAATCTATTTCCAAATAAGTAATTTTGATCCCAATTCCAAAGGCATCGCATATCGAGGAGATGCCGAGCCATCTAATGGGTTCATCGCGATTAATAGAATCGATTATATTTCCCGTGTTGGTTGGGTCACTTATTCCCAGCCAATAGAGCTCTGGGATTCTATCACCGGAAAACTTTCCGACTTTGTAACAAATTTCTCATTTGTTATAAACACACAAGGTCATTCTAAATATGGGCATGGACTCGCATTCTTTCTTGCTCCTTTCGGATTCGATATACCACCAAATTCATCGGGCGGCTTTCTAGGCCTGTTTAACACCACCACTAGTGATGCAAGTGACAACCAGATTGTTCTAGTTGAATTTGATTCTTTTTTGGATCAATGGGACCCACCCGTTCAGCATGTCGGAATTAATTTCAACTCTATTTGCTCTTCAGTTTATACATCGTGGAATGCTAGTCTTCACAGTGGAGAAACTGTCGCTGTTTCGATCACTTATAATGCTACTACTAAAAACTTGACCGTGTCGTGGAATTACCTAAGTTCCTCGACTGTAGAAGAGAATACTAGTCTATATTACCAGATCGATCTAATGAAGGTTTTGCCCGAGCAGGTCATGATCGGATTTTCAGCTTCCACGGGTCAAGAGGTCGAGCAACATAGCCTTTATTCATGGCAATTCTTGTCAAGTTTAGATGTAAAGGCAAAAAGTGGGAAACCTGAGAGAACAAGAAAATTGGAAGTGGGGATAATAATTTCTGGGGCTGTTCTGGTAATTGTGTTCATCATATCATTTGCAATAGCTTGGAGGCAAAAACAAAAGATGAAGGAGAAAAAGGAAGTGGTGAACTTGACATCGATCAATGATGATATCGAAAGTGGAGTGAGACCGAGGAGGTTTTCGTACAAAAGTCTTTCTTTGGCTACTAACAACTTCTCGAATGAGCGGAAGTTGGGTGAAGGAGGGTTTGGTACCGTTTACAAAGGTCACTTAACGGACATCGATATGTCTGTGGCCGTGAAGAGGATCACAAGAGGATCAAGGCAAGGGAAAAGGGAGTACATAACGGAAGTGGAGATTATTAGCAGGGTGGGGCATCGGAATTTGGTGCAACTCATCGGTTGGTGCCATGATAAAGGAGAGTTTCTAATTGTCTATGAACTCATGACGAATGGTAGCCTTGATTCTCACCTCTTCGGCAAAAGACTACCTCTTCCTTGGGCTGTAAGATGCAAAATATCATTGGGATTAGCTTCCGCATTGCTCTATCTTCATGAAGAATGGGAACAATGTGTCGTTCATAGAGATATCAAATCAAGTAATGTGATGTTGGATTCTGATTTCAATGTCAAGCTAGGCGATTTCGGATTAGCCCGGCTTATGGACCATGAGATAAACTCTCAAACAACTGGCTTGGCAGGAACATTTGGCTACATAGCTCCAGAATACATAAGTACCGGTCGAGCAAGTAAAGAATCAGATGTTTTCAGTTATGGAGTTGTTGCTTTAGAGATTGCGACTGGAAGAAAGTCAAGCGATCCGATGGAAATGTATTCTCACATCGGACTAGTAGAGTGGGTTTGGGATCTTTACGGAAGAGGTGAGCTTCGTGAAGCTATGGATGAGAGATTGGATAAGAATATCGACCTGAAGCAAATAGAGTGTTTGATGGTTGCCGGTTTATGGTGTGCTCATCCCAATAGGAGTTCGCGACCTTCCATAAGACAAGTGATTAATGTTCTCAATTCTGAAGGGGAAATGCCAAATCTTCCGGCGAAAATGCCCATTCCGACATTTCAAATGCCCAACCGTCAGTCTTTTTCTCATATCAAGAAACTATCTGTAGATGCAAGTTGTTGA 1932 41.72 MSSSLFINLLLFTISLFFLPFTCSIYFQISNFDPNSKGIAYRGDAEPSNGFIAINRIDYISRVGWVTYSQPIELWDSITGKLSDFVTNFSFVINTQGHSKYGHGLAFFLAPFGFDIPPNSSGGFLGLFNTTTSDASDNQIVLVEFDSFLDQWDPPVQHVGINFNSICSSVYTSWNASLHSGETVAVSITYNATTKNLTVSWNYLSSSTVEENTSLYYQIDLMKVLPEQVMIGFSASTGQEVEQHSLYSWQFLSSLDVKAKSGKPERTRKLEVGIIISGAVLVIVFIISFAIAWRQKQKMKEKKEVVNLTSINDDIESGVRPRRFSYKSLSLATNNFSNERKLGEGGFGTVYKGHLTDIDMSVAVKRITRGSRQGKREYITEVEIISRVGHRNLVQLIGWCHDKGEFLIVYELMTNGSLDSHLFGKRLPLPWAVRCKISLGLASALLYLHEEWEQCVVHRDIKSSNVMLDSDFNVKLGDFGLARLMDHEINSQTTGLAGTFGYIAPEYISTGRASKESDVFSYGVVALEIATGRKSSDPMEMYSHIGLVEWVWDLYGRGELREAMDERLDKNIDLKQIECLMVAGLWCAHPNRSSRPSIRQVINVLNSEGEMPNLPAKMPIPTFQMPNRQSFSHIKKLSVDASC 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10668309 10670240 + Conep09aG0147800.1 Cone9ag1435 445598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1435 643 FunFam L-type lectin-domain containing receptor kinase IX.1 321 412 - -
Cone9ag1435 643 Gene3D Phosphorylase Kinase; domain 1 321 412 - -
Cone9ag1435 643 SUPERFAMILY Protein kinase-like (PK-like) 320 627 IPR011009 -
Cone9ag1435 643 PANTHER - 50 615 IPR050528 GO:0005886(PANTHER)
Cone9ag1435 643 FunFam L-type lectin-domain containing receptor kinase IX.1 23 264 - -
Cone9ag1435 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 255 IPR013320 -
Cone9ag1435 643 CDD STKc_IRAK 342 606 - -
Cone9ag1435 643 FunFam Lectin-domain containing receptor kinase A4.3 413 625 - -
Cone9ag1435 643 ProSiteProfiles Protein kinase domain profile. 336 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1435 643 SMART serkin_6 336 605 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1435 643 Gene3D Transferase(Phosphotransferase) domain 1 413 626 - -
Cone9ag1435 643 Pfam Protein kinase domain 337 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1435 643 CDD lectin_legume_LecRK_Arcelin_ConA 25 255 IPR001220 GO:0030246(InterPro)
Cone9ag1435 643 Pfam Legume lectin domain 26 261 IPR001220 GO:0030246(InterPro)
Cone9ag1435 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1435 643 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524(InterPro)
Cone9ag1435 643 Gene3D - 23 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0205 Cone-Chr12:1045788 Cone9ag1435 Cone-Chr9:10668309 6.85E-287 dispersed
Cone6ag1511 Cone-Chr6:11942173 Cone9ag1435 Cone-Chr9:10668309 6.69E-252 dispersed
Cone6ag1512 Cone-Chr6:11949123 Cone9ag1435 Cone-Chr9:10668309 0 dispersed
Cone8ag0925 Cone-Chr8:8917454 Cone9ag1435 Cone-Chr9:10668309 2.98E-119 dispersed
Cone8ag1348 Cone-Chr8:10823275 Cone9ag1435 Cone-Chr9:10668309 2.19E-110 dispersed
Cone9ag1435 Cone-Chr9:10668309 Cone10ag1425 Cone-Chr10:11022006 7.25E-74 dispersed
Cone9ag1434 Cone-Chr9:10665161 Cone9ag1435 Cone-Chr9:10668309 7.66E-244 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83219 PF00069 Pkinase 6.20E-43 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1435 - - - 0.0