Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1443 ATGGTGTTTTCAGGTTCCTTGCAATTTTCCCAAGAATGGGGACTCTGTAGGAGCCAAGAGCGCAGAAAACACTATAAGTCTAAAGTAGGGAGAGAAAAGATGCATTTGTTGGGTGCTGGCTTTTCTTCACAAGTCTCATTTCAGCAAAAAAACTTATGGAGTATTTGCCTCTCAGACAGTTCATATCAGCCAATAAGTTCTTTGCCATACAGATGCAATATTCTCAAGTGCCATTCTTCTTTATTATCTGGAGGAGGATCTGAACTTCCTCATATGGTAAAAACAGTTGCTTCAGCATTGACGAGGTCGTATGAAATTTTGCAAGGTAGACCTCTTGTTCCAAAGTTGGTTCCAGCAATTGGTCTCATTATATTCGCTCTGTGGGGCATTGCTCCACTTTTGCATTGGACCCGAAATGCATTTCTTCATAGAAATGATAATGGTTGGAAGAAAAGTAGCACATATTATGTCATGACTTCTTATCTTCAACCTTTGCTGCTTTGGATGGGAGCAACACTTGTTTGCAGAGCATTGGATCCAGTGGTTCTACCAACAGAAGCTAGCCAGATTGTTAAACAACGACTCTTGAATTTTGTGAGGTCATTGTCAACTGTATTGGCCTTTGCCTATTGTTTATCAAGTGCAATTCAACAAGCGCACAAGTTCTTTATGGAGACTAATGAATCCAGTGATACAAGAACTATGGGTTTCCAATTTGCAGGAAAAGCTGTATATTCTGCAGTTTGGGTTGCTGCTGTTTCATTGTTCATGGAATTACTCGGTTTTTCTACCCAGAAGTGGCTTACTGCTGGAGGTCTTGGGACAGTATTGCTTACTCTTGCTGGCCGTGAGATATTCACAAATTTCCTTTCTAGTGCGATGATTCATGCAACCCGGCCTTTCATCGTGAATGAATGGATTCAAACAAAGATTGAAGGTTATGAAGTCTCTGGATTTGTTGAGCATGTGGGTTGGTGGTCCCCCACAATTGTAAGAGGTGAAGATCGAGAAGCAGTTCACATTCCAAACCACAAGTTCACTGTGAATGTTGTGAGGAATCTCAGTCAGAAAACTCATTGGCGTATTAAAACCCATCTAGCCATAAGTCATTTGGATGTCAATAAGATTAACAATATTGTTGCTGATATGCGCAAAGTCTTGGCCAAGAACCCTCAAGTTGAACACAAGAGGCTGCATAGGAGAGTCTTTCTTGACAATATCCATCCTGAAAATCAGGCACTTTTGATCTTAATATCCTGTTTTGTAAAAACCTCTCATCATGAAGAGTATCTACGTGTCAAGGAAGCTATACTATTGGATCTTCTTAGAGTCATCAGCCATCACAGAGCCCGGCTTGCCACTCCAATCCGTACAGTGCAGAAAATGTACAGTGACACAGACTTAGAGAACGTTCCATTTGCTGATTCAATATTCAACCATGGTGGAGCAGCATCTAGACGTCCATTACTCATGATCGAACCATCTTACAAAATCAATGGTGAAGATAAATCCAAGAATAAAAACCGTTCGGCCAAAGACAGTGAGACCCCGTCAAAACCAGCAGCTGACAACACAAATAAGGTCAAAGAAGCTCCACCATCTTCTGATGGGCCTGCTGTGGTTGAAGAAATTATTAATAAACCGACAGCAAAACAACCAGTCTTGAAGAAAGACTCCGAGGTGGACTTGGAAAAGTCAACTTTTGAGGCCACAGATAAGCAAGTAAATACGGAAAGTGAGAAAACGCAGCCACCAGTTGCGCAGCCACATTTGTCAAGGCCTGCCTTGGAAGAGAATATAGTACTTGGAGTTGCTTTAGAGGGGTCAAAGAGAACACTTCCCATTGAGGATGATGATATTCCTGCTTCTGAATCTCTTTCTGAAAAGACCACCTCTCGGAAAGGTAGCAGTGGGCCATTGACTGCTGAAAAGGATAAGAAAGATGTTCAGATTCAATCTTCTCCTTCACCAAGTGATTAA 1980 41.62 MVFSGSLQFSQEWGLCRSQERRKHYKSKVGREKMHLLGAGFSSQVSFQQKNLWSICLSDSSYQPISSLPYRCNILKCHSSLLSGGGSELPHMVKTVASALTRSYEILQGRPLVPKLVPAIGLIIFALWGIAPLLHWTRNAFLHRNDNGWKKSSTYYVMTSYLQPLLLWMGATLVCRALDPVVLPTEASQIVKQRLLNFVRSLSTVLAFAYCLSSAIQQAHKFFMETNESSDTRTMGFQFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYEVSGFVEHVGWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEHKRLHRRVFLDNIHPENQALLILISCFVKTSHHEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMYSDTDLENVPFADSIFNHGGAASRRPLLMIEPSYKINGEDKSKNKNRSAKDSETPSKPAADNTNKVKEAPPSSDGPAVVEEIINKPTAKQPVLKKDSEVDLEKSTFEATDKQVNTESEKTQPPVAQPHLSRPALEENIVLGVALEGSKRTLPIEDDDIPASESLSEKTTSRKGSSGPLTAEKDKKDVQIQSSPSPSD 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10712007 10716472 + Conep09aG0148600.1 Cone9ag1443 445606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1443 659 SUPERFAMILY Sm-like ribonucleoproteins 285 355 IPR010920 -
Cone9ag1443 659 MobiDBLite consensus disorder prediction 551 594 - -
Cone9ag1443 659 MobiDBLite consensus disorder prediction 608 659 - -
Cone9ag1443 659 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 648 IPR045042 -
Cone9ag1443 659 MobiDBLite consensus disorder prediction 553 576 - -
Cone9ag1443 659 MobiDBLite consensus disorder prediction 517 531 - -
Cone9ag1443 659 MobiDBLite consensus disorder prediction 498 516 - -
Cone9ag1443 659 MobiDBLite consensus disorder prediction 497 539 - -
Cone9ag1443 659 Gene3D - 195 299 - -
Cone9ag1443 659 Pfam Mechanosensitive ion channel, beta-domain 285 355 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1179 Cone-Chr17:8645818 Cone9ag1443 Cone-Chr9:10712007 4.44E-224 dispersed
Cone6ag1528 Cone-Chr6:12026912 Cone9ag1443 Cone-Chr9:10712007 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1443 K22047 - cit:102611122 812.372