Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag1493 | ATGACAGACCCAGTGTTTTTATCAGATCCCTTTAGTGAAGAACTCATGAAAGCACTCGAACCTTTTATGAAGAGTGCTTCATCTTCTACCCCTTCTTCGCCATCTTCACTTCCCTCTGTTTTTTCTTCTCATCCCAATTTACACCAAAACGTCCTCACCCAATTGAGTACCCCTATGTATACAGAGGGGTTCTCATTTCAAGACCAAACACGCCCATTAGGCCTTAACCAACTCACCACCTCTCAAATTCTCCAAATCCAATCCCAAATCAACCTCCAACAGGAGCAAATGGCAGGAGCCATGGCTCAACCTTCATCCCGAAAACAGAACCAATTAACCAACTTCCTTAGCCCCAAATCCATCCCGATGAAGCAAGTGGGCTCTCCTCCTCAAAAGTCCAATAAGCTCTACAGAGGTGTGAGACAGAGGCATTGGGGCAAATGGGTCGCCGAAATCCGGCTCCCTAAGAACCGAACCCGGCTCTGGCTCGGTACATTTGATACGGCCGAAGAAGCTGCTTTGGCTTATGATAGTGCTGCTTATAAGCTCAGGGGTGATTTTGCAAGGCTCAATTTACCTCATTTAAAGCACCAGTTTTCAAATTACAAGCCTCTCCCTTCCTCTGTTGATGCCAAGCTTGAAGCAATTTGCCAGAGCTTGGGTGATTTGCCGAAACAGGGGAAAACAGAGAAGCTCTGTTTGAAACAGAGTGTTATGGATTATTTTTCTTCCAATTCAAACGCAATTTTCGATGATTCTTCGGAATCTGATTTCAAAAGTGAATTGGAATGTTTCGGTTCAGAGGACGAAAAGGCTGAGAATTCAAATTCCTGGTGTTCGGCTTCGGCTTCTCCTCAATCCGAGATCACATTCTTGGATTTTAGTGAAGAAACAGAGGCTCTTGGATTGGAGAAGTACCCATCGGTGGAGATTGATTGGTCTGCTATCTGA | 951 | 45.01 | MTDPVFLSDPFSEELMKALEPFMKSASSSTPSSPSSLPSVFSSHPNLHQNVLTQLSTPMYTEGFSFQDQTRPLGLNQLTTSQILQIQSQINLQQEQMAGAMAQPSSRKQNQLTNFLSPKSIPMKQVGSPPQKSNKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDSAAYKLRGDFARLNLPHLKHQFSNYKPLPSSVDAKLEAICQSLGDLPKQGKTEKLCLKQSVMDYFSSNSNAIFDDSSESDFKSELECFGSEDEKAENSNSWCSASASPQSEITFLDFSEETEALGLEKYPSVEIDWSAI | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10975569 | 10977252 | - | Conep09aG0153800.1 | Cone9ag1493 | 445656 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag1493 | 316 | CDD | AP2 | 135 | 195 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | PRINTS | Ethylene responsive element binding protein signature | 159 | 175 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | PRINTS | Ethylene responsive element binding protein signature | 137 | 148 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | MobiDBLite | consensus disorder prediction | 23 | 42 | - | - | |
Cone9ag1493 | 316 | Gene3D | AP2/ERF domain | 136 | 194 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | SMART | rav1_2 | 136 | 199 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | SUPERFAMILY | DNA-binding domain | 136 | 194 | IPR016177 | GO:0003677(InterPro) | |
Cone9ag1493 | 316 | ProSiteProfiles | AP2/ERF domain profile. | 136 | 193 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 10 | 316 | IPR051758 | GO:0005634(PANTHER)|GO:0043565(PANTHER) | |
Cone9ag1493 | 316 | FunFam | Ethylene-responsive transcription factor 2 | 135 | 194 | - | - | |
Cone9ag1493 | 316 | Pfam | AP2 domain | 136 | 185 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1493 | 316 | MobiDBLite | consensus disorder prediction | 22 | 42 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1447 | Cone-Chr12:10443107 | Cone9ag1493 | Cone-Chr9:10975569 | 4.83E-30 | dispersed | |
Cone7ag1858 | Cone-Chr7:12016591 | Cone9ag1493 | Cone-Chr9:10975569 | 2.51E-22 | dispersed | |
Cone8ag1497 | Cone-Chr8:11365914 | Cone9ag1493 | Cone-Chr9:10975569 | 5.21E-30 | dispersed | |
Cone9ag0847 | Cone-Chr9:4140632 | Cone9ag1493 | Cone-Chr9:10975569 | 3.65E-36 | dispersed | |
Cone9ag1493 | Cone-Chr9:10975569 | Cone9ag1320 | Cone-Chr9:9921631 | 1.25E-21 | dispersed | |
Cone17ag1230 | Cone-Chr17:8918498 | Cone9ag1493 | Cone-Chr9:10975569 | 1.03E-58 | wgd | |
Cone20ag0497 | Cone-Chr20:2660368 | Cone9ag1493 | Cone-Chr9:10975569 | 2.05E-53 | wgd | |
Cone4ag1350 | Cone-Chr4:11006044 | Cone9ag1493 | Cone-Chr9:10975569 | 9.59E-70 | wgd | |
Cone6ag1574 | Cone-Chr6:12274587 | Cone9ag1493 | Cone-Chr9:10975569 | 5.12E-185 | wgd | |
Cone7ag1581 | Cone-Chr7:10838004 | Cone9ag1493 | Cone-Chr9:10975569 | 3.32E-73 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46911 | PF02992 | Transposase_21 | 2.50E-23 | CL0219 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag1493 | K09286 | - | csv:101211347 | 287.345 |