Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1499 ATGGTTTCTTTACTTCAAGGGATCTTCCCCATCTTTTTTTGGTGCCGGAATTACAAAGCTACAAGATTCAAGAATGATCTAATTGCTGGTCTAACTCTTGCCTGCATTTGTATTCCCCAGAGTATTGGGTATGCAACTTTGGCAAAGCTTGAACCGCAATATGGCTTGTATACAAGCGTTGTCCCACCGCTAATTTATGCCATAATGGGATCGTCGAGAGAGATTGCGATTGGACCAGTGGCCATCGTTTCGTTACTTTTGCCGTCAATGATTCAAAAACTACAAGATCCAACGGCCGATCCAGCTTCTTACAAGAAACTTGTCTTGACGGCGACTTTTTTCGCCGGCGTCTTTCAAGCTGCCTTTGGAATCTTCAGGTTGGGATTTCTTGTGGATTTTCTATCACATGCGGCAATAGTGGGGTTTGTGGGAGGAGCAGCGGTTGTGATTGGTCTTCAACAACTGAAAGGACTACTTGGGATCACTCACTTCACCAACAAAACTGATGTTGTCTCTGTTATCAAAGCTGTCTGGAAATCATTTGAACACCATCCTTGGAATCCCAGCAATTTTATCCTCGGTTGCTCATTCTTGTCATTTATTCTGATCACTAGGCTTCTGGGTAAAAAATACAAGAAACTTTTCTGGTTGCCTGCAATTTCACCTCTAATATCTGTGACAATGTCAACCCTTCTAGTTTACTTAACAAGAGCAGATAACCATGGGGTCAAAATAGTGAAACACATTCATGGAGGGTTGAATCCAAGCTCCATTCATGAGTTACAATTTGATAGTCCTGTTGTTGGAGAGATTGCTAAGATCGGATTGGTCGTTGCACTCGTTGCTCTCACCGAAGCTATTGCTGTCGGACGATCATTCGCATCGATAAAAGGATACCATTATGATGGGAACAAAGAAATGCTGGCCATGGGAGTGATGAATGTAGCCGGCTCTTTCACTTCTTGCTACGTTGCCACTGGGTCATTTTCACGCACCGCCGTGAACTTCAGTGCCGGGTGCGAGACGATTGTGTCAAATATAGTGATGGCTATAACGGTGTTGATATCGCTCGAGTGTTTAACAAGGCTATTATACTTCACTCCAACAGCTATAATTGCCTCAATAATTATTTCTGCTCTTCCGGGACTTATCGACCTCAGTGAAGCTTATAACATTTGGAAGGTCGACAAGCTCGACTTTGTTGCTTGCATAGCCGCCTTCTTCGGGGTGTTGTTCGTATCCGTCGAGATTGGTCTACTTGCCTCGGTGATCATATCATTTGCAAAGATAATACTCATCTCAATCCGACCGGGGACCGAGACTCTTGGAAAAATCCCTGGAACTGACGTATTCGGCGATGTTGATCAATATCCTATGTCGATTAAAATTCCCGGCATCCTCATCGTCCGCGTGAAGTCTTCGTTGCTTTGCTTTGCAAATGCTAACTTTGTTAGAGAAAGAATTCTGAGATGGGTAATTCATGAAGAACAAGTACAAGAGGGTGACCCTAAAGCAAGCTCCAAAACAACTATCCATCTTGTAATATTTGACATGTCAAATTTGATGAACGTCGACACATCCGGAGTTGCTTCTTTGGATGAATTGCACAAGAATTTGGTTTCCCGTAAAATCGAGTTAGCCATTGTGAATCCAAAGTGGCAAGTGATTCATAAGCTAAAGGTTGCAAATTTTGTAGCAAAACTTGGAGGAAGAAACATCTTCTTGACTGTTTCAGAAGCTATGGATGCTTTCCTTGGTGCCAAAATGTCTACCATCTAA 1779 42.89 MVSLLQGIFPIFFWCRNYKATRFKNDLIAGLTLACICIPQSIGYATLAKLEPQYGLYTSVVPPLIYAIMGSSREIAIGPVAIVSLLLPSMIQKLQDPTADPASYKKLVLTATFFAGVFQAAFGIFRLGFLVDFLSHAAIVGFVGGAAVVIGLQQLKGLLGITHFTNKTDVVSVIKAVWKSFEHHPWNPSNFILGCSFLSFILITRLLGKKYKKLFWLPAISPLISVTMSTLLVYLTRADNHGVKIVKHIHGGLNPSSIHELQFDSPVVGEIAKIGLVVALVALTEAIAVGRSFASIKGYHYDGNKEMLAMGVMNVAGSFTSCYVATGSFSRTAVNFSAGCETIVSNIVMAITVLISLECLTRLLYFTPTAIIASIIISALPGLIDLSEAYNIWKVDKLDFVACIAAFFGVLFVSVEIGLLASVIISFAKIILISIRPGTETLGKIPGTDVFGDVDQYPMSIKIPGILIVRVKSSLLCFANANFVRERILRWVIHEEQVQEGDPKASSKTTIHLVIFDMSNLMNVDTSGVASLDELHKNLVSRKIELAIVNPKWQVIHKLKVANFVAKLGGRNIFLTVSEAMDAFLGAKMSTI 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11017937 11022881 + Conep09aG0154400.1 Cone9ag1499 445662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1499 592 Gene3D STAS domain 436 586 IPR036513 -
Cone9ag1499 592 ProSitePatterns SLC26A transporters signature. 52 73 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cone9ag1499 592 Pfam Sulfate permease family 23 406 IPR011547 GO:0016020(InterPro)
Cone9ag1499 592 PANTHER SULFATE TRANSPORTER 3 583 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag1499 592 FunFam Sulfate transporter 31 436 587 - -
Cone9ag1499 592 NCBIfam sulfate permease 10 580 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag1499 592 CDD STAS_SulP_like_sulfate_transporter 457 577 - -
Cone9ag1499 592 ProSiteProfiles STAS domain profile. 476 584 IPR002645 -
Cone9ag1499 592 Pfam STAS domain 458 580 IPR002645 -
Cone9ag1499 592 SUPERFAMILY SpoIIaa-like 462 584 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0474 Cone-Chr20:2524751 Cone9ag1499 Cone-Chr9:11017937 1.08E-169 wgd
Cone4ag1354 Cone-Chr4:11038032 Cone9ag1499 Cone-Chr9:11017937 1.12E-205 wgd
Cone6ag1580 Cone-Chr6:12317946 Cone9ag1499 Cone-Chr9:11017937 0 wgd
Cone7ag1578 Cone-Chr7:10808977 Cone9ag1499 Cone-Chr9:11017937 1.19E-222 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1499 K17469 - rcu:8265600 874.389