Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag1533 | ATGGGGACAGGAGAAGAGGCTACTCCTCCTAAGACTACCAGACCAGCTTCTTCATCTCAGGAAATTCCAACAACACCTTCATATCCCGATTGGTCCAGCTCGATGCAGGCTTATTACGGAGCCGGCGCGACGCCACCTCCGTTTTTTGCATCAACTCCCAGTCCCCACCCCTATATGTGGGGAGCCCAGCATCCTTTGATTCCACCATATGGGACCCCTGTCCCATATCCATCTATATATCCTCCAGGCGGAGTTTATGCTCATCCTAATATGACCACGGTACCACTCTCAGCTCAGACTACCACGGAAACAGAAGGGAAGGTGCCTGACGGAAAGGACAAGGCTTCTGGGAAAAAATCAAAGGGTGGTCAAGGAAATAGTGTGAAGGTGGCACCTTCAGGTTCTGGAAATGATGGTCAAAGTACTGAAAGTGCTACTGAGGGTTCTTCTGATGGTAGCGATGAGAATCTAAACCAACAGGAATTTTCTGCAAGTAAGAGGGGAAGCTTCGACCAGATGCTTGCAGATGCCAATGCACAGAATACCAGTGCTGGGCCAAACCTTCAACCTTCAGTAATTGGAAAACCCATAGTCCCTATGCCCCCAACCAATCTGAATATAGGAATGGACTTATGGAACTCGGGCGCTGCTGGTTCTGTGCCTGCAAAAATGAGGCCCAATCAAACAGGTGGCGCCCTTGTCCCGGCTCCTCCCGAGCCATGGATTCAAAAGGACGAACGGGAACTGAAAAGACAGAAGAGGAAGCAATCTAATAGGGAGTCGGCCCGTAGGTCACGACTGCGTAAGCAGGCGGAATGTGAAGAGTTACAAGCAAGGGTGGAGGCATTGGGCAATGAGAATAGAACTCTTAGAGATGAGTTGCAGGGTCTTTCCGATGAATGTGAGAAGCTTGTATCGGAAAATAGTTCCCTCAAGGAAGAATTGACGCAGTTGTGTGGACTGGAAGCGCTAAGTAACCTTGAAGACGGAAATCCCAAATCAGCTCTTGAATCTCATGGTGGTGAAGGTAAATAG | 1035 | 49.28 | MGTGEEATPPKTTRPASSSQEIPTTPSYPDWSSSMQAYYGAGATPPPFFASTPSPHPYMWGAQHPLIPPYGTPVPYPSIYPPGGVYAHPNMTTVPLSAQTTTETEGKVPDGKDKASGKKSKGGQGNSVKVAPSGSGNDGQSTESATEGSSDGSDENLNQQEFSASKRGSFDQMLADANAQNTSAGPNLQPSVIGKPIVPMPPTNLNIGMDLWNSGAAGSVPAKMRPNQTGGALVPAPPEPWIQKDERELKRQKRKQSNRESARRSRLRKQAECEELQARVEALGNENRTLRDELQGLSDECEKLVSENSSLKEELTQLCGLEALSNLEDGNPKSALESHGGEGK | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 11169867 | 11173301 | + | Conep09aG0157900.1 | Cone9ag1533 | 445696 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag1533 | 344 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 253 | 268 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1533 | 344 | SMART | brlzneu | 246 | 310 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Cone9ag1533 | 344 | Gene3D | - | 249 | 304 | - | - | |
Cone9ag1533 | 344 | SUPERFAMILY | Leucine zipper domain | 249 | 305 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1533 | 344 | Coils | Coil | 259 | 314 | - | - | |
Cone9ag1533 | 344 | FunFam | BZIP transcription factor | 248 | 299 | - | - | |
Cone9ag1533 | 344 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 15 | 325 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0043565(InterPro)|GO:0043565(PANTHER) | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 241 | 255 | - | - | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 10 | 39 | - | - | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 215 | 271 | - | - | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 120 | 167 | - | - | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 323 | 344 | - | - | |
Cone9ag1533 | 344 | Pfam | bZIP transcription factor | 246 | 308 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1533 | 344 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 248 | 311 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1533 | 344 | Pfam | G-box binding protein MFMR | 1 | 91 | IPR012900 | - | |
Cone9ag1533 | 344 | CDD | bZIP_plant_GBF1 | 251 | 301 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag1533 | 344 | MobiDBLite | consensus disorder prediction | 99 | 169 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag0496 | Cone-Chr8:3532227 | Cone9ag1533 | Cone-Chr9:11169867 | 2.47E-41 | dispersed | |
Cone8ag0602 | Cone-Chr8:5238875 | Cone9ag1533 | Cone-Chr9:11169867 | 6.83E-41 | dispersed | |
Cone6ag1607 | Cone-Chr6:12444611 | Cone9ag1533 | Cone-Chr9:11169867 | 1.86E-199 | wgd | |
Cone8ag1185 | Cone-Chr8:10158430 | Cone9ag1533 | Cone-Chr9:11169867 | 4.53E-12 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46913 | PF00168 | C2 | 2.50E-24 | CL0154 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag1533 | K09060 | - | csv:101217128 | 446.432 |