Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1542 ATGGCAAACATGATCGCCGATAGTGGAAATCTAATGGCTATAGCTCAACAAGTGATGAAGCAGAAGCAGCAGCAAGAACAGCAGCAGAAACAGCATCATAATCATCATCAGAATCACCAGCTTAATGAGCTCACTACCACTTTTTCTCTCACCACTACTCCTTGGACTAATAATAACTCTCACCACGCTCCCAATTTGGCGTTTGTTGGGCTTCCGGGCTCTTCTGGATTTCCCGACCCGTTTCAGGTGGTTTCTACTGCCGCCGGAGCTGATGCCGGAGGAGGAGCTGAGACGAGTTTTCCGTTTGCCAACTTAGACCACCACCATACAGGATTTAGGTTTGCCGAATTTGGCGGCGGTGGCGGCGGAGCTGGGGGTACTGAGTTTGAGTCGGACGACTGGATGGATAGTTTAATGGCTGGTGGAGATTCAACGGATAGTTCCAACCTTCCATCTGGATGTGACACGTGGCAGAGTAATGCCGAGTTTAATCTTTACGGCTCTGATCCGTTCGCACCCTGCAACCCGAGTCGACTCAGCATAGCTTGCTCTCCGCCGTCGGATCTTAACCGAGTAAACATCAACCCTTCTACACTTGACCAAACTCAAGTTCCCGCATGGGTTCCGCCTCCTCAACTTCCATCTCCACCACCATCTCTTCTCCACGACACGAAGCAACCGCAGCAGCAGCAACTTCACAAGACGGACACCGTTTACGGCGGCTCATCGAGCTCGCCAGAAATCGAATCAACACCACCTCTTCTGAAAACTCTACTCGATTGTGCTCAACTCACTGAGTCTGAACCAGATCGAGCTGTGAAAACACTGATTCGACTCAGAGAATCGTTATCGGAGCACGGAGATCCGACTGAGAGAGTTGCCTTCTACTTCTCCGAAGCTCTTTACAGCAGGTTATCTCCTCGATCGGATCAAATCTCATCATCAGTATCATCTTCGCTCTGCGAAACAACTTCTGAAGAGTTCACTCTGTCTTACAAAGCTTTAAACGATGCTTGTCCTTACTCAAAATTCGCTCATCTCACTGCAAATCAAGCGATTCTCGAAGTTACAGGACGAGCTAGTAAGATTCATATAGTTGATTTCGGCATCGTTCAAGGAGTTCAATGGGCCGCCCTACTACAAGCATTAGCGACAAGGTCCACCGGACGGCCGAGTAAAATTCGGATCTCTGGCATACCAGCTCCGGTCCTCGGTGAATCTCCAGCGGCGTCGCTGTTAGCTACTAGAAATCGTCTGTGCGAGTTCGCGAAGCTTCTGGAACTCAACTTCGAGTTCGAACCGATTCTAACACCGATCGAGGAATTGACCGAGTCGTGCTTCCGAGTAGACTCGGATGAGGTACTCGGCGTGAATTTCATGCTCCAACTTTATAACCTGTTGGACGAAACTCCGGTTGCGGTTCAAAACGCTCTACGGTTAGCAAAATCTTTGAATCCCAACATAGTGACCCTAGGAGAGTACGAAGCTAACCTGAACCGGGTTGGCTTCGTGAAGCGTTTCAAGAACGCATTGATGTATTACACGGCCATTTTCGAATCGCTTGAACCGAGTTTGAACCGCGAATCGCCAGAGAGACTCGAGGTAGAAAAAATCCTGCTCAGCCGGCGGATTGCCGGCGTGATCGGAACAGATGATCAACTGGGAAGGCGGAGAGAAAGGATGGCAGATAAGGAGCATTGGAAAATAATGATGGAGAGCTCAGGGTTTGAACCGGTTTCGATGAGTCATTACTCGGTGAGTCAAGCTAAGATTCTGTTGTGGAACTATAACTACAGCTCTCTTTATTCGGTGATCGAATCTCCTCCTGGGTTTCTCTCTTTGGCATGGAACGACGTCCCTTTGCTCACAGTTTCTTCATGGCGTTGA 1887 49.23 MANMIADSGNLMAIAQQVMKQKQQQEQQQKQHHNHHQNHQLNELTTTFSLTTTPWTNNNSHHAPNLAFVGLPGSSGFPDPFQVVSTAAGADAGGGAETSFPFANLDHHHTGFRFAEFGGGGGGAGGTEFESDDWMDSLMAGGDSTDSSNLPSGCDTWQSNAEFNLYGSDPFAPCNPSRLSIACSPPSDLNRVNINPSTLDQTQVPAWVPPPQLPSPPPSLLHDTKQPQQQQLHKTDTVYGGSSSSPEIESTPPLLKTLLDCAQLTESEPDRAVKTLIRLRESLSEHGDPTERVAFYFSEALYSRLSPRSDQISSSVSSSLCETTSEEFTLSYKALNDACPYSKFAHLTANQAILEVTGRASKIHIVDFGIVQGVQWAALLQALATRSTGRPSKIRISGIPAPVLGESPAASLLATRNRLCEFAKLLELNFEFEPILTPIEELTESCFRVDSDEVLGVNFMLQLYNLLDETPVAVQNALRLAKSLNPNIVTLGEYEANLNRVGFVKRFKNALMYYTAIFESLEPSLNRESPERLEVEKILLSRRIAGVIGTDDQLGRRRERMADKEHWKIMMESSGFEPVSMSHYSVSQAKILLWNYNYSSLYSVIESPPGFLSLAWNDVPLLTVSSWR 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11208012 11210429 + Conep09aG0158800.1 Cone9ag1542 445705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1542 628 ProSiteProfiles GRAS family profile. 245 628 IPR005202 -
Cone9ag1542 628 Pfam GRAS domain family 255 628 IPR005202 -
Cone9ag1542 628 MobiDBLite consensus disorder prediction 201 250 - -
Cone9ag1542 628 MobiDBLite consensus disorder prediction 17 40 - -
Cone9ag1542 628 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 236 627 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone9ag1542 628 MobiDBLite consensus disorder prediction 207 221 - -
Cone9ag1542 628 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0417 Cone-Chr9:1924848 Cone9ag1542 Cone-Chr9:11208012 1.03E-38 dispersed
Cone12ag0754 Cone-Chr12:6965512 Cone9ag1542 Cone-Chr9:11208012 1.64E-21 wgd
Cone6ag1617 Cone-Chr6:12490663 Cone9ag1542 Cone-Chr9:11208012 0 wgd
Cone8ag0799 Cone-Chr8:8031598 Cone9ag1542 Cone-Chr9:11208012 8.66E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46915 PF10354 DUF2431 9.90E-22 CL0063 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1542 - - - 0.0