Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1543 ATGGCAGGAGGAGATCAAGACCATCTACTTGTACCTTCTATTGTTTCCAAGACTTGCACATTTACTCAACAAGATCAACCTCATGATCATCATGTCCATAATAAATCAATCATTAGTAATAATACTAATAATAGTAATAATAATCACCAATTTTCAGACTTTGATGCTTCGCTGCTTCTATCTTCTCCCAAAATTCCGAAATCAATCACCCCAATTTCTTCCGCCACAACCGATCATGACTGTCGTCATCATCACCACCATCACCATCATCTCCAGGCCTGCTCGGAGCCCGTCCGTAGGCCTAGGGGCCGGCCTGCTGGCTCCAAAAACAAGCCAAAACCTCCCATCATTGTAACGCGTGACAGCGCCAACTCTCTCCGAGCCCATGCTATCGAGGTTAGCTCCGGTTGCGACGTGAATGAGAATCTAACAAACTTCGCTCGGAGAAAACAGGTTGGGATTTCTATACTTAGCGGAAGCGGTTGTGTCACTAATGTCACGATCCGACAGCCATCCTCTTCCGGAGCAATTGTTACACTTCACGGCAGGTTCGAGATTCTGTCTTTGGTGGGGTCCATCTTGCCACCTCCAGCCCCACCAGGAATGACCGGAGTTACGATTTACTTGTCGGGCCCACAGGGACAGGTTATGGGGGGGATTGTGATCGGGCAACTGATTGCATCGGGCCCGGTTATGATAATGGCTGCTACGTTTATGAACGCTACTTTCGATCGACTTCCATTGGATTTCGAGGATTATGAAATTGGAGGTGGAGGAGCATTGCAAAACAGCCAGCATTATCAGAATGGGAGGAATCATCACTCCCAGTTTGAAGTGTCGGAACTTTACGGGTTGCCACAGAACTTAATTGCTAATCGGAATCTTCCTCCGGAGATATATTCTTGGGCGTCGACTCGAGCTTTGTCCAAGTCTTAG 936 47.44 MAGGDQDHLLVPSIVSKTCTFTQQDQPHDHHVHNKSIISNNTNNSNNNHQFSDFDASLLLSSPKIPKSITPISSATTDHDCRHHHHHHHHLQACSEPVRRPRGRPAGSKNKPKPPIIVTRDSANSLRAHAIEVSSGCDVNENLTNFARRKQVGISILSGSGCVTNVTIRQPSSSGAIVTLHGRFEILSLVGSILPPPAPPGMTGVTIYLSGPQGQVMGGIVIGQLIASGPVMIMAATFMNATFDRLPLDFEDYEIGGGGALQNSQHYQNGRNHHSQFEVSELYGLPQNLIANRNLPPEIYSWASTRALSKS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11218034 11219248 + Conep09aG0159000.1 Cone9ag1543 445706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1543 311 ProSiteProfiles PPC domain profile profile. 123 263 IPR005175 -
Cone9ag1543 311 MobiDBLite consensus disorder prediction 69 117 - -
Cone9ag1543 311 MobiDBLite consensus disorder prediction 22 49 - -
Cone9ag1543 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 249 - -
Cone9ag1543 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 49 271 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone9ag1543 311 CDD DUF296 127 238 IPR005175 -
Cone9ag1543 311 Gene3D - 125 256 - -
Cone9ag1543 311 FunFam AT-hook motif nuclear-localized protein 126 254 - -
Cone9ag1543 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 239 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0727 Cone-Chr9:3470444 Cone9ag1543 Cone-Chr9:11218034 2.74E-71 dispersed
Cone6ag1619 Cone-Chr6:12498853 Cone9ag1543 Cone-Chr9:11218034 1.92E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1543 - - - 0.0