Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag1543 | ATGGCAGGAGGAGATCAAGACCATCTACTTGTACCTTCTATTGTTTCCAAGACTTGCACATTTACTCAACAAGATCAACCTCATGATCATCATGTCCATAATAAATCAATCATTAGTAATAATACTAATAATAGTAATAATAATCACCAATTTTCAGACTTTGATGCTTCGCTGCTTCTATCTTCTCCCAAAATTCCGAAATCAATCACCCCAATTTCTTCCGCCACAACCGATCATGACTGTCGTCATCATCACCACCATCACCATCATCTCCAGGCCTGCTCGGAGCCCGTCCGTAGGCCTAGGGGCCGGCCTGCTGGCTCCAAAAACAAGCCAAAACCTCCCATCATTGTAACGCGTGACAGCGCCAACTCTCTCCGAGCCCATGCTATCGAGGTTAGCTCCGGTTGCGACGTGAATGAGAATCTAACAAACTTCGCTCGGAGAAAACAGGTTGGGATTTCTATACTTAGCGGAAGCGGTTGTGTCACTAATGTCACGATCCGACAGCCATCCTCTTCCGGAGCAATTGTTACACTTCACGGCAGGTTCGAGATTCTGTCTTTGGTGGGGTCCATCTTGCCACCTCCAGCCCCACCAGGAATGACCGGAGTTACGATTTACTTGTCGGGCCCACAGGGACAGGTTATGGGGGGGATTGTGATCGGGCAACTGATTGCATCGGGCCCGGTTATGATAATGGCTGCTACGTTTATGAACGCTACTTTCGATCGACTTCCATTGGATTTCGAGGATTATGAAATTGGAGGTGGAGGAGCATTGCAAAACAGCCAGCATTATCAGAATGGGAGGAATCATCACTCCCAGTTTGAAGTGTCGGAACTTTACGGGTTGCCACAGAACTTAATTGCTAATCGGAATCTTCCTCCGGAGATATATTCTTGGGCGTCGACTCGAGCTTTGTCCAAGTCTTAG | 936 | 47.44 | MAGGDQDHLLVPSIVSKTCTFTQQDQPHDHHVHNKSIISNNTNNSNNNHQFSDFDASLLLSSPKIPKSITPISSATTDHDCRHHHHHHHHLQACSEPVRRPRGRPAGSKNKPKPPIIVTRDSANSLRAHAIEVSSGCDVNENLTNFARRKQVGISILSGSGCVTNVTIRQPSSSGAIVTLHGRFEILSLVGSILPPPAPPGMTGVTIYLSGPQGQVMGGIVIGQLIASGPVMIMAATFMNATFDRLPLDFEDYEIGGGGALQNSQHYQNGRNHHSQFEVSELYGLPQNLIANRNLPPEIYSWASTRALSKS | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 11218034 | 11219248 | + | Conep09aG0159000.1 | Cone9ag1543 | 445706 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag1543 | 311 | ProSiteProfiles | PPC domain profile profile. | 123 | 263 | IPR005175 | - | |
Cone9ag1543 | 311 | MobiDBLite | consensus disorder prediction | 69 | 117 | - | - | |
Cone9ag1543 | 311 | MobiDBLite | consensus disorder prediction | 22 | 49 | - | - | |
Cone9ag1543 | 311 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 123 | 249 | - | - | |
Cone9ag1543 | 311 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 49 | 271 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone9ag1543 | 311 | CDD | DUF296 | 127 | 238 | IPR005175 | - | |
Cone9ag1543 | 311 | Gene3D | - | 125 | 256 | - | - | |
Cone9ag1543 | 311 | FunFam | AT-hook motif nuclear-localized protein | 126 | 254 | - | - | |
Cone9ag1543 | 311 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 127 | 239 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone9ag0727 | Cone-Chr9:3470444 | Cone9ag1543 | Cone-Chr9:11218034 | 2.74E-71 | dispersed | |
Cone6ag1619 | Cone-Chr6:12498853 | Cone9ag1543 | Cone-Chr9:11218034 | 1.92E-172 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag1543 | - | - | - | 0.0 |