Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1558 ATGGAGAGCCTCGCGCATTCTAGGCAGCACTCGAGTAGGGGTTCTTCTGCCAAGCTTGCTTCTAAGAAAAGCTTCAACAACAGCAACAGAAGCCACAATGGCGGCTCATTTTCAGCTAAGACCATCTATGACGATGTTTATGGGGGTCCACCTAAGTTCACCGCCTCTGCCGCTCTCTCTCCCCGCTTGGAAGACTACAGTGAGATTTTCGGCAGCTTTCACGTTTCGCGCGCTTCTTCCATTCCCTTCCTCGATCTTCCTCCCGTCGATGAAATGGAGATATCCTTTGACGTTCGGAGTTCCGGCTTTGACTACTTTGAAGTTTTCGGAGCTTCCGACGGCCTCGATTTCGCCGTTTCGTATGACGAATTGATCGATCAATCCAGGCCAAGAGAACAAGAAGAAGACGATTCCTACCAAGAAGCTTGGACTCCAGCAAGAACCGAATCTCTGTCTGGAGACTCAGATCATTCGGGAAAGAATCTTCGTTTCTCAAACGGAGATTTCAACCCCTCATTTGATGCAAGTCCAGAGTTTAACATATCCTACAATACGGCTATTATTCGACAAATCACTGGAGGTTCGACCAATGGGATGGCGACGCATGACAGCGGAATCACCTACCTTGGGGATGAATTAACTCCCGATAAGAATCCTTCCTCCTTCCAGGTTTGTGATGATAGCTATCTCAATTTGGATTTTAGTATGAAAAACGAGATTAAGGGCAAGCGTTTTAACAATGGTGATGGACTGGCATTTAGAAATGCTCCGAATGAGATGTTTGTAACCATATCAGAGATCAATCTTAGAACTGAGCCTTGTCATGTTCCACCGCCGGCTCGTCCACCTCCCAGAAAGGACGTGGGTCCCACAGGATTGAATTCAACTGCTGAAGTTGGTTCAGGTGATAGCTCTCCTACTTTTTTTGATGTGGAGGTGGATTCTAGTTCATCAGCTGCTGCCTCGGCTGCAGCCATTAAAGAAGCGATGGAGAAAGCTAAAGCGAAAATACAAAGTGCTAAAGAAAGAATGGAGAAGAAGGAGGGTGGGGTCCATAACCGTGTAAAACCGGTTCCGAAAATTGATGATATGGAAGATGGAAAAGCTGAGGTTATAAAGACAACTGATAACAAGCCTAGTGCTTTTGAGAAAGTTGATTGTGCTAATGAGTGGAAAGAAGAAATGGGTTTTTTCGAATTGGTGAGAACGGATAAACCTAGAAAGGTTGCTTCTGGGCAGGTGAATGAGGAGAGGGTATTGGTTAATAATGATCATGGGGAGAAGGAAAGGGAGAAGACTGTCATGGAAGCATTTATGGAGCAGCTAGAAGAAAATGACAAGAAAGTGAAAGCAAATCGAAAAGCTCATGGACTGAAGGAAAAAGACACATCGAAGTCAAAAAAACCAGCTAAAGAAGATAAAAAGAAAACCGGGCTGGCCCAGCCCTTTTCAGAGAGTAAGACAGAAATAGATGAAGCAACTAAAGTTGGGAAAGAAGAAAATTTGGTGGGGTTTAAATACAGAGAAAATATTTGTGAATCTGACCCGGCAATGCCTCGGAGAGAAAGCGAGGGAAAAAAGAAAGAGGCTGATAAGAGAAATGAGAGTTATAGTATACTCGATGAGTCTCGAAGAAGAGAAGACAGTAGTAAGGAACAGAAGGACACTGCTCAGCATGAAGAGACTAAGAAAGTAGTTCATGAGGAAGAAAATGAGAAAAGGCTAAAAGAGGCTGCTCTTAATGAACAAGCAGAAGAGAATAAGAAGAGAATTGAAGAGGGGGTCATAAGACTGAATAAGGAGGTTCCTGAGCAGGAAGAGAATGAGAGGAGGATTAAAGAGACTCTTGAGAAGGAAGAGAACTTGAAGAGACAAGAAGAAGGAGAAGAAGATGGTGGAGAATATGAGAGGGAATTGGAAGAAGCTCTTGCCCGGGAAATTTTCAAGCAAAGAGAAAGGGAAGCATCTAAACTGCTTTACCAGGAGTACGGCTACAGAAAAAGGTCAAGATTTCAGCATGTAGAAGCATGTGAGACAATATTCGAGGAATCATTTGAACTGGGTGACATTGACAACAACATATCAAAAGATAATAGTGAGTGTGAAGAAGAGGGGACGGAGACGATGCTTAGAGATGATTTTCATGAGAGAGAAGCTTTCAAGGGAGTAAGTAGTCAAGCTAATGATGAACACATGATAACAATGGAAGTAAATACTCAAGAGGGCCTTACTAAAGCAAAAGGACCGACAGTAAAACCTGAATCCCCTTTTAGTGAAATTCAACCAGAAAACCCGAAAGTTGATGAAAAACCAAAAGATGCTAAGAAAGTTGAAATGGAAGAATTGAAACATGATCATGATAAAGAGAGGCAATTTGCTCAAGGGAGGCTGATAAATCAAGGGGTGAAAGAGAGTGCTGAAAAGGAGAAGAATCTAAATGACATTCTTGAATCCAGAAGGAAAGAAAATGAGAGGTTGAAGAATGAGGAGAAAGAACTTGAGAATGAACGGCTCAGAAAGTTGGAAGAAGAGAGAGAGAGAGAGAGGGAAAGGGAAAAGGATAGGATGGTTGCTAATGATGCTCAACAAAGAGTGATGAATGAGGCTCGTGAAAGGTTAGAGAGAGCCTGTACTGAGGCTAGAGAGAAGTCACTAGCAGGTAGGGCAGCCATGGAGGCGAAGATTCGGGCAGATCGGGCAGCAGTAGAGCGAGCAAATGCAGAGGCCAGAGAACGGATGGAAAGATCTGTTTCTGACAAATTCTCTGCTTCCTCTTCTTCCAGAAATAATGGAATGAGACAGTCCTCCTCTTCCTCTGATCTTTCTAATCTAAAATCTCAAAGTATGGGTCCTACTTCCACTGGTTTAAGATACGCCTATTCATCGTCATTCTCTGAGAGAACTGAGGGGGCTGAAGGGGAAACGGCTCAAAGGTGTAAAGCCAGATTGGAAAGGTACCAGAGAACAGCAGAACGAGCGGCTAAAGCTCTTGCCGAGAAGAATAAGCATGATCTTCTTGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAAACTCTAGATGCCGATGTCAGAAGGTGGTCAAGCGGGAAAGAAGGGAACTTGCGAGCCTTACTATCAACATTACAATATATTCTTGGACCTGATATTGGATGGCAGCCCATCCCCCTGACTGAAGTTATAACCTCAGCCGCTGTAAAGAAAGCTTACCGGAAAGCAACTCTTTGCGTTCATCCTGATAAGTTGCAGCAAAGAGGTGCAAATATTCAACAGAAGTATGTTTGTGAAAAGGTCTTCGATCTCCTCAAGGAAGCTTGGAACAAATTCAATTCGGAAGAGAGGTAG 3348 43.61 MESLAHSRQHSSRGSSAKLASKKSFNNSNRSHNGGSFSAKTIYDDVYGGPPKFTASAALSPRLEDYSEIFGSFHVSRASSIPFLDLPPVDEMEISFDVRSSGFDYFEVFGASDGLDFAVSYDELIDQSRPREQEEDDSYQEAWTPARTESLSGDSDHSGKNLRFSNGDFNPSFDASPEFNISYNTAIIRQITGGSTNGMATHDSGITYLGDELTPDKNPSSFQVCDDSYLNLDFSMKNEIKGKRFNNGDGLAFRNAPNEMFVTISEINLRTEPCHVPPPARPPPRKDVGPTGLNSTAEVGSGDSSPTFFDVEVDSSSSAAASAAAIKEAMEKAKAKIQSAKERMEKKEGGVHNRVKPVPKIDDMEDGKAEVIKTTDNKPSAFEKVDCANEWKEEMGFFELVRTDKPRKVASGQVNEERVLVNNDHGEKEREKTVMEAFMEQLEENDKKVKANRKAHGLKEKDTSKSKKPAKEDKKKTGLAQPFSESKTEIDEATKVGKEENLVGFKYRENICESDPAMPRRESEGKKKEADKRNESYSILDESRRREDSSKEQKDTAQHEETKKVVHEEENEKRLKEAALNEQAEENKKRIEEGVIRLNKEVPEQEENERRIKETLEKEENLKRQEEGEEDGGEYERELEEALAREIFKQREREASKLLYQEYGYRKRSRFQHVEACETIFEESFELGDIDNNISKDNSECEEEGTETMLRDDFHEREAFKGVSSQANDEHMITMEVNTQEGLTKAKGPTVKPESPFSEIQPENPKVDEKPKDAKKVEMEELKHDHDKERQFAQGRLINQGVKESAEKEKNLNDILESRRKENERLKNEEKELENERLRKLEEEREREREREKDRMVANDAQQRVMNEARERLERACTEAREKSLAGRAAMEAKIRADRAAVERANAEARERMERSVSDKFSASSSSRNNGMRQSSSSSDLSNLKSQSMGPTSTGLRYAYSSSFSERTEGAEGETAQRCKARLERYQRTAERAAKALAEKNKHDLLAQREQAERHRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPDIGWQPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGANIQQKYVCEKVFDLLKEAWNKFNSEER 1115
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11288162 11292748 + Conep09aG0160600.1 Cone9ag1558 445721

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 128 142 - -
Cone9ag1558 1115 Gene3D DnaJ domain 988 1115 IPR036869 -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 513 588 - -
Cone9ag1558 1115 Coils Coil 323 350 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 919 957 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 800 866 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 603 630 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 8 37 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 420 480 - -
Cone9ag1558 1115 SUPERFAMILY Chaperone J-domain 976 1114 IPR036869 -
Cone9ag1558 1115 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 1115 - GO:0005737(PANTHER)|GO:0030276(PANTHER)|GO:0031982(PANTHER)|GO:0043231(PANTHER)|GO:0072318(PANTHER)|GO:0072583(PANTHER)
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 690 709 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 143 163 - -
Cone9ag1558 1115 Coils Coil 806 855 - -
Cone9ag1558 1115 Coils Coil 540 560 - -
Cone9ag1558 1115 Coils Coil 976 1015 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 407 588 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 893 918 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 802 866 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 488 506 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 893 957 - -
Cone9ag1558 1115 FunFam Auxilin-related protein 1 986 1115 - -
Cone9ag1558 1115 Coils Coil 566 629 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 739 773 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 1 37 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 128 163 - -
Cone9ag1558 1115 Coils Coil 888 910 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 273 305 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 342 361 - -
Cone9ag1558 1115 Coils Coil 859 886 - -
Cone9ag1558 1115 MobiDBLite consensus disorder prediction 603 638 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1558 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0004 Cone-Chr8:55820 Cone9ag1558 Cone-Chr9:11288162 9.59E-57 dispersed
Cone9ag1217 Cone-Chr9:8858598 Cone9ag1558 Cone-Chr9:11288162 2.39E-60 dispersed
Cone4ag1922 Cone-Chr4:13635799 Cone9ag1558 Cone-Chr9:11288162 1.82E-60 wgd
Cone6ag1638 Cone-Chr6:12565717 Cone9ag1558 Cone-Chr9:11288162 0 wgd
Cone7ag1834 Cone-Chr7:11939248 Cone9ag1558 Cone-Chr9:11288162 3.37E-61 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g999 Blo04g00910 Blo16g00053 . . Bpe15g00422 Bpe13g00437 . . . . . Cma07g00477 Car03g00673 Car07g00420 Sed14g1132 Cpe19g00817 Cpe10g00623 Bhi03g01324 Tan03g1999 Cmetu08g1509 . . . . Cla01g01920 . . . Clacu01g2027 Cmu01g1902 . . Cone12ag0778 Cone6ag1638 Cone9ag1558 Lsi01g00666 . . Cme08g00860 . . Bda11g01857 . . . Bma03g00985 Bma06g00115 . . Cmo07g00477 . . . . . . . . . . . . . . . . . . . . . Csa06g03256 Chy02g00633 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004571 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 2 41