Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag1578 | ATGGCGTGGATTAATGTGATTGGAGGTTTCTGGGTATTGGTAATAAGTAGTATTACAGTAGGGTGGTATTGGTTTTATAATTATAACAACAAGGTGAAGAAGAAAAAGAAGAAGATGGAGACTGATGATGATAGGATTCCAAAAGGAAGCTTAGGTTGGCCTCTCATCGGTGAAACGCTGGACTTCATTGCCTCTGGCTACTCTTCCCGCCCTGTCTCCTTCATGGACAAACGCAAATCTCTTTATGGGAAAGTGTTCAAAACGCACATATTGGGAACACCAATCATCGTGTCCACAGATCCGGAGGTGAACAAGGCCATCCTTCAAAACCATGGGAACACCTTCATCCCGGCTTATCCCAAATCCATCCGGGAATTACTCGGCCCCTACTCCATCCTCCAAACGAATGGAATCATCCAAAAACGCCTCCATACAGTCATCGGCAGCTTCCTCCGCTCCCCTCTCCTCAAATCTCGTATCACCAAACACATCGAAACCACCGTCAAGCTCACTCTCTCCTCCTGGACATCCTGCGCCGGGCTCGGCCACCATCGCCGTCGGCTGATTCATCTCCAGGACGAGACTAAGAACATCACGTTCGAGGTTCTAGTGAACGTTCTGATGAGTGTGGGCCCAGGTGGTGACCTGGACTTCTTGAAGAGAGAATTCCGGGAGTTCATCAAGGGCTTGATCTGTTTGCCGGTTAAGTTTCCTGGGACGAGGCTTTATAAATCGTTGAAGGCTAAGGAGAAGATGTTGAAGATGGTGAGAAGGATCGTGGAAGAGCGAATCGTGACACGTGGGGGATTGGCGAAGGTTGATGATAATCCAGTTGTGGACGTGGTGGACGTGCTCTTACAGAATAACTGTGAGTCGTCGTCGGATGAGATGCAACGCCTGCCGTTGGATTTCATCAGCGGGAACATCGTGGAGATGATGATCCCAGGTGAAGAAACCATGCCCACGGCTATGACGTTGGCTGTCAAATTTTTGAGTGACTGCCCCGTCGCGCTAGAGCAGATCAAGGTGGAGAATATGGAATTGAAGAAGCAGAAGACAGATTCCAGGGAGGAGTATGCATGGACAGACTACATGTCGTTGCCATTTACTCAAAATGTGATCAGTGAAACACTCAGGATGGCAAATATAATCAACGGGGTTTGGAGAAAAGCTCTAAAAGATGTAGAGATCAAAGGTCATTTGATACCAGAAGGTTGGTGCGTTATGGCATCTTTCAGTTCAGTGCATATGGATGAAGAGAATTACGTAAATCCATACCAGTTTGATCCATGGAGATGGGAGAAAATGGGAGCTAGCAGTACTAATAACAGTAGCTTTACACCGTTCGGAGGGGGACAAAGGCTATGCCCCGGTTTAGAACTATCCAGGCTTCAAATCTCAATCTTCCTTCATCATCTTCTGACCATTTACAAATGGGCTGCGGAGAAGGATGAAATCATTTACTTTCCAACGGTGAAGATGAGGAGGAAGCTACCCATCGTAGTCACACCCTTATAA | 1518 | 47.17 | MAWINVIGGFWVLVISSITVGWYWFYNYNNKVKKKKKKMETDDDRIPKGSLGWPLIGETLDFIASGYSSRPVSFMDKRKSLYGKVFKTHILGTPIIVSTDPEVNKAILQNHGNTFIPAYPKSIRELLGPYSILQTNGIIQKRLHTVIGSFLRSPLLKSRITKHIETTVKLTLSSWTSCAGLGHHRRRLIHLQDETKNITFEVLVNVLMSVGPGGDLDFLKREFREFIKGLICLPVKFPGTRLYKSLKAKEKMLKMVRRIVEERIVTRGGLAKVDDNPVVDVVDVLLQNNCESSSDEMQRLPLDFISGNIVEMMIPGEETMPTAMTLAVKFLSDCPVALEQIKVENMELKKQKTDSREEYAWTDYMSLPFTQNVISETLRMANIINGVWRKALKDVEIKGHLIPEGWCVMASFSSVHMDEENYVNPYQFDPWRWEKMGASSTNNSSFTPFGGGQRLCPGLELSRLQISIFLHHLLTIYKWAAEKDEIIYFPTVKMRRKLPIVVTPL | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 11342020 | 11345459 | + | Conep09aG0162800.1 | Cone9ag1578 | 445741 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag1578 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone9ag1578 | 505 | SUPERFAMILY | Cytochrome P450 | 45 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | Pfam | Cytochrome P450 | 47 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | E-class P450 group IV signature | 416 | 434 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | E-class P450 group IV signature | 73 | 96 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | E-class P450 group IV signature | 456 | 474 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | E-class P450 group IV signature | 440 | 456 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | E-class P450 group IV signature | 367 | 383 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PANTHER | CYTOCHROME P450 26 | 45 | 477 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cone9ag1578 | 505 | Gene3D | Cytochrome P450 | 35 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 34 | 505 | - | - | |
| Cone9ag1578 | 505 | Coils | Coil | 338 | 358 | - | - | |
| Cone9ag1578 | 505 | CDD | CYP90-like | 78 | 504 | - | - | |
| Cone9ag1578 | 505 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag1578 | 505 | PRINTS | P450 superfamily signature | 372 | 383 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone8ag0806 | Cone-Chr8:8116467 | Cone9ag1578 | Cone-Chr9:11342020 | 5.64E-89 | dispersed | |
| Cone9ag0757 | Cone-Chr9:3623858 | Cone9ag1578 | Cone-Chr9:11342020 | 1.62E-79 | dispersed | |
| Cone20ag1300 | Cone-Chr20:8462824 | Cone9ag1578 | Cone-Chr9:11342020 | 4.22E-167 | transposed | |
| Cone6ag1653 | Cone-Chr6:12616615 | Cone9ag1578 | Cone-Chr9:11342020 | 1.01e-316 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag1578 | K12637 | - | cit:102623590 | 686.797 |