Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1608 ATGGCTTCCATCCAACTTCCCTTAGTTTTAATCTCTTTTATGATCCTTCATTTTCTTCCAGGTAGTCATGTTAATTCAGCTACATTCACGATCTTAAACAAATGCGACTATTCAGTATGGCCTGGAATATTATCCAACGCGGGGACCCCACAGCTCTCCCCCACCGGCTTTACTCTTCTCTCAGGCGATTCCACCACCCTCACCGCTCCCACTTCCTGGTCCGGTCGCATTTGGGGTCGTACCTACTGCTCCCAATCCGGAACATCATTCTCATGCACCACGGCCGACTGCAGCTCCGGCATGGTGGAATGCAAGGGCAGTGGCGCTATCCCACCCGCCACTTTAGCAGAATTCACCTTAAATGGAGCCAATGGTCTCGATTTCTATGATGTGAGCCTCGTGGATGGTTATAATATTGACATGCTGGTAGCCCCACAAGGCGGGACCGGAGGAAACTGTTCGAGCACTGGGTGTGTTTCTGATCTGAACATTGATTGCCCCTCGGAGCTACGTGTGGTGATGGATGGTAGCGACGAGACCGTGGCGTGTAGGAGTGCTTGTGAGGCATTTGGCGATGCGCAGTATTGTTGTAGTGGTGCGTACTCGAGTCCGAATACGTGCAAACCGAGCAGTTACTCGGAGTATTTTAAAAGAGGGTGCCCTCAAGCTTATAGCTATGCTTATGACGATGCAACCAGCACGTTTACCTGTGCTTCGGCTAATTATCTGATTACCTTTTGTCCTTCCCCTATCACCAGTTCGAAAGCATGGAATGGATCGAACCCAGAAGGGTCAGCAGTCAGCGTCTCAGGAAGCTGCCATTACAGGTGCTGCTCCATCACCATCTTCATACGCATTGTGATTGCCACCGCATGGAGAGATGAAAGAGAGTTGGATGATCAAACATCTCCACACCGCACACCGCACACCGCACACTCTCACACTCACTCTCCTTCCTCTTATCTTCCCCTCTGTAAAGCTTCCCAGTTCAACCAATATCATTAA 1005 50.15 MASIQLPLVLISFMILHFLPGSHVNSATFTILNKCDYSVWPGILSNAGTPQLSPTGFTLLSGDSTTLTAPTSWSGRIWGRTYCSQSGTSFSCTTADCSSGMVECKGSGAIPPATLAEFTLNGANGLDFYDVSLVDGYNIDMLVAPQGGTGGNCSSTGCVSDLNIDCPSELRVVMDGSDETVACRSACEAFGDAQYCCSGAYSSPNTCKPSSYSEYFKRGCPQAYSYAYDDATSTFTCASANYLITFCPSPITSSKAWNGSNPEGSAVSVSGSCHYRCCSITIFIRIVIATAWRDERELDDQTSPHRTPHTAHSHTHSPSSYLPLCKASQFNQYH 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11503598 11505277 + Conep09aG0165800.1 Cone9ag1608 445771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1608 334 PANTHER OS03G0233200 PROTEIN 14 248 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Cone9ag1608 334 CDD TLP-PA 28 247 - -
Cone9ag1608 334 SMART tha2 29 248 IPR001938 -
Cone9ag1608 334 ProSiteProfiles Thaumatin family profile. 26 248 IPR001938 -
Cone9ag1608 334 Pfam Thaumatin family 33 248 IPR001938 -
Cone9ag1608 334 MobiDBLite consensus disorder prediction 299 320 - -
Cone9ag1608 334 FunFam THAUMATIN-LIKE PROTEIN 1 27 248 - -
Cone9ag1608 334 Gene3D Thaumatin 27 248 IPR037176 -
Cone9ag1608 334 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Cone9ag1608 334 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Cone9ag1608 334 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Cone9ag1608 334 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Cone9ag1608 334 SUPERFAMILY Osmotin, thaumatin-like protein 27 249 IPR037176 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0753 Cone-Chr5:3233926 Cone9ag1608 Cone-Chr9:11503598 1.08E-33 dispersed
Cone7ag1896 Cone-Chr7:12165863 Cone9ag1608 Cone-Chr9:11503598 3.50E-60 dispersed
Cone9ag1608 Cone-Chr9:11503598 Cone9ag1609 Cone-Chr9:11505533 9.95E-93 tandem
Cone17ag1410 Cone-Chr17:9689129 Cone9ag1608 Cone-Chr9:11503598 7.75E-119 wgd
Cone20ag0072 Cone-Chr20:349185 Cone9ag1608 Cone-Chr9:11503598 2.79E-119 wgd
Cone4ag1978 Cone-Chr4:13879218 Cone9ag1608 Cone-Chr9:11503598 4.35E-118 wgd
Cone6ag1687 Cone-Chr6:12785740 Cone9ag1608 Cone-Chr9:11503598 6.53E-24 wgd
Cone8ag0854 Cone-Chr8:8476467 Cone9ag1608 Cone-Chr9:11503598 3.03E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1608 - - - 0.0