Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1620 ATGTCTCGGTGTTTTCCATACCCTCCACCAGGCTACAAAATTAAAACGATCAGCAATGACGACCTGATCGAATCGCTTAAGAGAGAAGCAGAGAAGGCCAAGAAAGAGAAAAAGAAAGAGAGGAAATGGGAGAAGAAAGAAAGGGTAAAGGCCAAGGGAAATGGAGAGAGTGATGATAAAAATCATGGTCATAAGAAAAGGCATAAGGATGATAAGGGTCAAGATGAAAAAGGAGGCCAGAAAGAGAAAAGACAAAGGGAGACTGAAAGTCTTGAGAAAAGTAGTGTCACAGAAGAACACGGTCATCCTGTTGGGTCTGAGGACTCTTCCAACAGTACCCTTAACAGCGAAAAAAGGCAAAAGATGAGCATTTTCCCAGATGACAGCCAAACCTTTGGAAGCGTTTTCCGGATCCGGTTGCCTTTCCAAAGGCACAGAGATCCAGAAGTGCTACCCAGCAAGGAGCATCCTTGCTCTTCATGGGATGGCCTTGTCCAGTGTAAGCACGAATCAGCTCCGTGTCCGGGCAGAGGTTTAGATGAAACTCCCTGTTCCCCGGCCGAACATGTGAGCCAAGGACCCACCCTCCGGCAAAGCATAGAAGAGCCGTGCGCCACTTCTGGTGCATCAGAATTTCTTTCTATGCCTTCTTCATCATCTGTGCCCAGTAACAAGGCCTCCTCAAAAATTTCACAATTCAGAGATCTTTTTCAAAACTGGGTTCCTCCGCCCATGCTACCAGAATTTACAGATTCCGATGATCAAGGGTGGCTGTTTGAGACAAGGAAGAACAACAGCAATGGGGTTGAAAGATGTAGTGTACAACCTGACAGTTTGATGGGTCAGGGAAACTCAAACTGTTGGCCAAGGGCATGCTACTTAGCTGATGCTGAGATCTACGCCTTGCCTTTCACATTGCCAATATAA 927 46.39 MSRCFPYPPPGYKIKTISNDDLIESLKREAEKAKKEKKKERKWEKKERVKAKGNGESDDKNHGHKKRHKDDKGQDEKGGQKEKRQRETESLEKSSVTEEHGHPVGSEDSSNSTLNSEKRQKMSIFPDDSQTFGSVFRIRLPFQRHRDPEVLPSKEHPCSSWDGLVQCKHESAPCPGRGLDETPCSPAEHVSQGPTLRQSIEEPCATSGASEFLSMPSSSSVPSNKASSKISQFRDLFQNWVPPPMLPEFTDSDDQGWLFETRKNNSNGVERCSVQPDSLMGQGNSNCWPRACYLADAEIYALPFTLPI 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11555427 11558472 - Conep09aG0167000.1 Cone9ag1620 445783

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1620 308 MobiDBLite consensus disorder prediction 1 130 - -
Cone9ag1620 308 PANTHER MYB-LIKE PROTEIN X 1 149 - -
Cone9ag1620 308 MobiDBLite consensus disorder prediction 20 105 - -
Cone9ag1620 308 Coils Coil 19 47 - -
Cone9ag1620 308 MobiDBLite consensus disorder prediction 106 130 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1620 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1903 Cone-Chr7:12195996 Cone9ag1620 Cone-Chr9:11555427 1.48E-17 dispersed
Cone4ag2002 Cone-Chr4:13973128 Cone9ag1620 Cone-Chr9:11555427 1.18E-21 wgd
Cone6ag1696 Cone-Chr6:12813466 Cone9ag1620 Cone-Chr9:11555427 1.92E-171 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1158 . Blo16g00091 . . . Bpe13g00405 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1696 Cone9ag1620 . . . . . . Bda11g01826 . . . . Bma06g00088 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003832 2 2 1 3 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 2 1 3 45