Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1624 ATGTCTATGTCTTCAGATGAAGCGGAAATAGCACCCGAAGAAACAATTCAGACAGAGGAGGTTGAAATGGAGGATATTGTAGTAGAAGTAGAAGAGCCCATTACGGATATAGACAGTTGTGATGTCAAGAATCCGCTTGCTGCTGTCGACTATGTTGATGATCTATACGCACACTACAAGAAATTTGAGAGTCATAGCTGTGTGTCGCCAAACTATATGGAGCAACAATGTGACATTAACGCGAAGATGAGGGGTATATTGATCGACTGGCTTATTGAGGTGCATGATAAATTTGAGCTGATGAAGGAAACGCTATTCCTTATGGTTAATCTGATAGACAGATTCTTAGCCCGGCAAAACATAGTTAGAAAGAAGCTTCAATTGGTCGGTTTGGTTGCCGTGCTCTTAGCTTGCAAGTACGAGGAAGTGTCTGTTCCTATTGTGGGAGATATGATTCTGATATCGGACAAAGCTTACTGGAGGAGAGAAATACTAGAAATGGAGACATTGATGCTGAACACCCTCCAATTCAACATGTCAGTCCCAACCCCATATGTGTTCATGCGCAGGTTCCTGAAGGCTGCTCAATCGGAGAAGAAACTGGAGCAACTGTCCTTCTTGATCAAACTATGCTTAGTGGAGTACGAGATGGTGAAGTAA 660 42.73 MSMSSDEAEIAPEETIQTEEVEMEDIVVEVEEPITDIDSCDVKNPLAAVDYVDDLYAHYKKFESHSCVSPNYMEQQCDINAKMRGILIDWLIEVHDKFELMKETLFLMVNLIDRFLARQNIVRKKLQLVGLVAVLLACKYEEVSVPIVGDMILISDKAYWRREILEMETLMLNTLQFNMSVPTPYVFMRRFLKAAQSEKKLEQLSFLIKLCLVEYEMVK 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11579755 11581906 + Conep09aG0167400.1 Cone9ag1624 445787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1624 219 SMART cyclin_7 89 173 IPR013763 -
Cone9ag1624 219 Pfam Cyclin, C-terminal domain 182 219 IPR004367 -
Cone9ag1624 219 Gene3D - 54 219 - -
Cone9ag1624 219 SUPERFAMILY Cyclin-like 181 218 IPR036915 -
Cone9ag1624 219 Gene3D - 68 180 - -
Cone9ag1624 219 PIRSF Cyclin_A_B_D_E 2 219 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cone9ag1624 219 FunFam G2/mitotic-specific cyclin 68 180 - -
Cone9ag1624 219 PANTHER CYCLINS 33 219 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cone9ag1624 219 Pfam Cyclin, N-terminal domain 54 180 IPR006671 -
Cone9ag1624 219 SUPERFAMILY Cyclin-like 43 179 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0859 Cone-Chr12:7710310 Cone9ag1624 Cone-Chr9:11579755 1.44E-94 dispersed
Cone7ag1934 Cone-Chr7:12340108 Cone9ag1624 Cone-Chr9:11579755 1.75E-90 dispersed
Cone8ag0889 Cone-Chr8:8686330 Cone9ag1624 Cone-Chr9:11579755 1.64E-92 dispersed
Cone8ag1603 Cone-Chr8:11871861 Cone9ag1624 Cone-Chr9:11579755 6.16E-50 dispersed
Cone4ag2018 Cone-Chr4:14050059 Cone9ag1624 Cone-Chr9:11579755 2.82E-90 wgd
Cone6ag1701 Cone-Chr6:12844184 Cone9ag1624 Cone-Chr9:11579755 1.23E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1624 K21777 - rcu:8268759 291.197