Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag1634 | ATGTGCCGATATCTTGCGGTTTCTGCCATCCTTGGGAACATCTTCTCTGCACTCTTCACCTTCTTCTTTGCATTCGTGGGCAGCTTGTTAGGAGCTATGACTGGAGCATTGAGAGGTCAAGAAACAGGGAGTGGATTTATGAGAGGGGCTGCAGTTGGAGCAATCTCTGGGGCTGTTTTCTCTATAGAAGTTTTTGAGTCTTCCCTTCTTCTTTGGCATTCTGATGAATCTGGGATATGCCGTCTCCTCCTCTACTTGATTGATGTCATTGCAAGCCTTGTCAGTGGGAGACTTGTTCGCGAACGGGTTGGTCCAGCCATGTTAAGTGCGGTTCAAAGCCAGATGGATGCGGTTGCTACAAGCTTTGATGACGTTCCCAACATGTTTGACACTGGATGCCCCAAAGGTTTGTCTGCAGTTTCGGTAAAAAAGATATCAAAGATGAGGATTTATAAGAATGATAACATAGATACTTCTGGGGAGCAAGTCTGTTGCTCGGTGTGCCTTCAGGAGTTTTCGGTTGGAGAAATGGTGAGAAGTTTACCTCATTGTCAACACATGTTTCACCAGCCTTGCATCGATGAGTGGCTTCTGAGACAAGCATCTTGCCCTCTCTGCAGAAGAGATATATGA | 633 | 46.13 | MCRYLAVSAILGNIFSALFTFFFAFVGSLLGAMTGALRGQETGSGFMRGAAVGAISGAVFSIEVFESSLLLWHSDESGICRLLLYLIDVIASLVSGRLVRERVGPAMLSAVQSQMDAVATSFDDVPNMFDTGCPKGLSAVSVKKISKMRIYKNDNIDTSGEQVCCSVCLQEFSVGEMVRSLPHCQHMFHQPCIDEWLLRQASCPLCRRDI | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 11624420 | 11625453 | + | Conep09aG0168400.1 | Cone9ag1634 | 445797 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag1634 | 210 | Pfam | Ring finger domain | 165 | 207 | IPR001841 | - | |
Cone9ag1634 | 210 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 129 | 210 | IPR013083 | - | |
Cone9ag1634 | 210 | SMART | ring_2 | 165 | 206 | IPR001841 | - | |
Cone9ag1634 | 210 | FunFam | NEP1-interacting protein-like 1 | 125 | 210 | - | - | |
Cone9ag1634 | 210 | ProSiteProfiles | Zinc finger RING-type profile. | 165 | 207 | IPR001841 | - | |
Cone9ag1634 | 210 | SUPERFAMILY | RING/U-box | 145 | 210 | - | - | |
Cone9ag1634 | 210 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 2 | 209 | IPR044523 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0839 | Cone-Chr12:7573641 | Cone9ag1634 | Cone-Chr9:11624420 | 1.41E-79 | dispersed | |
Cone18ag0440 | Cone-Chr18:2144666 | Cone9ag1634 | Cone-Chr9:11624420 | 4.32E-13 | dispersed | |
Cone19ag0063 | Cone-Chr19:390709 | Cone9ag1634 | Cone-Chr9:11624420 | 5.86E-33 | dispersed | |
Cone6ag0068 | Cone-Chr6:356945 | Cone9ag1634 | Cone-Chr9:11624420 | 1.30E-18 | dispersed | |
Cone7ag0376 | Cone-Chr7:1642801 | Cone9ag1634 | Cone-Chr9:11624420 | 5.04E-11 | dispersed | |
Cone7ag1070 | Cone-Chr7:8146237 | Cone9ag1634 | Cone-Chr9:11624420 | 1.34E-12 | dispersed | |
Cone9ag0083 | Cone-Chr9:367232 | Cone9ag1634 | Cone-Chr9:11624420 | 7.54E-19 | dispersed | |
Cone8ag0872 | Cone-Chr8:8586233 | Cone9ag1634 | Cone-Chr9:11624420 | 8.97E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag1634 | - | - | - | 0.0 |