Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1634 ATGTGCCGATATCTTGCGGTTTCTGCCATCCTTGGGAACATCTTCTCTGCACTCTTCACCTTCTTCTTTGCATTCGTGGGCAGCTTGTTAGGAGCTATGACTGGAGCATTGAGAGGTCAAGAAACAGGGAGTGGATTTATGAGAGGGGCTGCAGTTGGAGCAATCTCTGGGGCTGTTTTCTCTATAGAAGTTTTTGAGTCTTCCCTTCTTCTTTGGCATTCTGATGAATCTGGGATATGCCGTCTCCTCCTCTACTTGATTGATGTCATTGCAAGCCTTGTCAGTGGGAGACTTGTTCGCGAACGGGTTGGTCCAGCCATGTTAAGTGCGGTTCAAAGCCAGATGGATGCGGTTGCTACAAGCTTTGATGACGTTCCCAACATGTTTGACACTGGATGCCCCAAAGGTTTGTCTGCAGTTTCGGTAAAAAAGATATCAAAGATGAGGATTTATAAGAATGATAACATAGATACTTCTGGGGAGCAAGTCTGTTGCTCGGTGTGCCTTCAGGAGTTTTCGGTTGGAGAAATGGTGAGAAGTTTACCTCATTGTCAACACATGTTTCACCAGCCTTGCATCGATGAGTGGCTTCTGAGACAAGCATCTTGCCCTCTCTGCAGAAGAGATATATGA 633 46.13 MCRYLAVSAILGNIFSALFTFFFAFVGSLLGAMTGALRGQETGSGFMRGAAVGAISGAVFSIEVFESSLLLWHSDESGICRLLLYLIDVIASLVSGRLVRERVGPAMLSAVQSQMDAVATSFDDVPNMFDTGCPKGLSAVSVKKISKMRIYKNDNIDTSGEQVCCSVCLQEFSVGEMVRSLPHCQHMFHQPCIDEWLLRQASCPLCRRDI 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11624420 11625453 + Conep09aG0168400.1 Cone9ag1634 445797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1634 210 Pfam Ring finger domain 165 207 IPR001841 -
Cone9ag1634 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 210 IPR013083 -
Cone9ag1634 210 SMART ring_2 165 206 IPR001841 -
Cone9ag1634 210 FunFam NEP1-interacting protein-like 1 125 210 - -
Cone9ag1634 210 ProSiteProfiles Zinc finger RING-type profile. 165 207 IPR001841 -
Cone9ag1634 210 SUPERFAMILY RING/U-box 145 210 - -
Cone9ag1634 210 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 2 209 IPR044523 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0839 Cone-Chr12:7573641 Cone9ag1634 Cone-Chr9:11624420 1.41E-79 dispersed
Cone18ag0440 Cone-Chr18:2144666 Cone9ag1634 Cone-Chr9:11624420 4.32E-13 dispersed
Cone19ag0063 Cone-Chr19:390709 Cone9ag1634 Cone-Chr9:11624420 5.86E-33 dispersed
Cone6ag0068 Cone-Chr6:356945 Cone9ag1634 Cone-Chr9:11624420 1.30E-18 dispersed
Cone7ag0376 Cone-Chr7:1642801 Cone9ag1634 Cone-Chr9:11624420 5.04E-11 dispersed
Cone7ag1070 Cone-Chr7:8146237 Cone9ag1634 Cone-Chr9:11624420 1.34E-12 dispersed
Cone9ag0083 Cone-Chr9:367232 Cone9ag1634 Cone-Chr9:11624420 7.54E-19 dispersed
Cone8ag0872 Cone-Chr8:8586233 Cone9ag1634 Cone-Chr9:11624420 8.97E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1634 - - - 0.0