Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00029 | ATGAAACTTATGGTTTTGAGGTATTCTCCATTTTTCTTGGTCTTGTTGGTTTGTGTACTGCCTCTGGTTCGAGCTGGAGATGCAGAAGCTCTGTTAGCATTGAAAGCATCTCTCGACCCTGGGAACTCGCTGCCATGGCGAGGAAGTTCCATCTGCAACTGGCAAGGCGTAAAAGAGTGCACAAATGGACGGGTAACTAAGCTCGTTTTGGAACATCTAAATCTCTCTGCTGTTCTTAACGACAAAATTTTGAATCGTTTAGATCAGCTTCGTGTTCTTAGTTTCAAAGGAAATTCACTTTCTGGTCAAATCCCTGACCTTTCGGGTCTCGTTAATCTCAAATCCCTCTATCTAAGCGACAACAACTTTTCCGGCGAGTTTCCGAGCTCCATCTCCGACCTTCACCGCCTGAAGGTCGTCGTCGTTTCCGGTAACCAAATATCTGGCCCCATTCCAGACTCGCTGCTGAAACTCCGGCGTCTCTATGTTCTACACCTTCAGGACAACCAATTCAGTGGCTCCATCCCTCCTTTCAAGCAAACCAGTCTTCGATTCTTCAATGTCTCTAACAACCGACTCTCCGGCGACATCCCAGTAACCCCCACCTTGGTCCGCTTCAATGTGTCGTCATTTTCCGGCAACCTGGAACTTTGCGGAGAACAAATTCAGAAGCCCTGTGGAAATGTTGCCATTGCGCCATCATCGAGTCGCTCTTATCCGCAAGTCACTGGCTCAAGCTCGTCTTCAAGACGCACCAAATTGGTCAAGATAATAGCAGGAAGCGTTGGTGGGTTTGTCGGACTTCTATTGATCATTCTTCTACTGTTTATGATTTGCAAATGCAGGGAAAGAAAGAGTCTATCCGAGGTCAGAAACAAAGGAATCGACGACGAGGGAATGAGGATGGAGGAAGCATCTGGAATCTCCGCCGGCGGCAGAGGAGGTAATAATGGAGGAAAGCAAGGGGGATTTTCATGGGAAAGTGAAGGACTAGGAAGCCTAGTGTTCTGCGGAGCAGGGGATGAGAAAATGACTTATAGCTTGGAAGATCTGTTGAAAGCTTCGGCGGAGACTTTGGGCAGAGGGACCATGGGAAGCACATACAAGGCTGTGATGGAATCTGGGTATATTGTTACAGTGAAACGGCTGAAGGATGCAAGGTACCCTCGAGCAGAGGAGTTCGGACGGCAGATGGAGGTTCTTGGGCGGCTCAGACACCCCAACCTGGTCCCTCTCAGGGCCTATTTCCAGGCTAAGGAAGAACGCTTGCTCGTATATGATTATTTCCCTAATGGCAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCCTGCCTTAAAATAGCTGAAGACTTGGCCAATGGTTTGTTGTATATCCACCAGAACCCTGGCTTAACCCATGGAAACCTGAAATCCTCAAATGTACTACTAGGATCTGATTTCGAAGAAGAGGAGACAGAGTCTGGGGATGATCCTGCATCTGGGAACGAGGCATCGGAAGAGAAACTTCAAGCTCTTTTGAACATTGCAATGGCTTGTGTTTCGCTGATGCCACAAAACCGACCAATGATGAGAGAAGTTCTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGTAGTGACCATTCACCAGGTAGCTGGTCTGATATTGTCCAGAGTTTGCCCAGGGATGAACATTTAGTTTCAACAAAACAAGAAGCAGAGAAGGAGCGAGCTGATGCACTTGGTTCATCCTCGTCTTGCTGTTCATTTGATAGGAAATAA | 1809 | 47.43 | MKLMVLRYSPFFLVLLVCVLPLVRAGDAEALLALKASLDPGNSLPWRGSSICNWQGVKECTNGRVTKLVLEHLNLSAVLNDKILNRLDQLRVLSFKGNSLSGQIPDLSGLVNLKSLYLSDNNFSGEFPSSISDLHRLKVVVVSGNQISGPIPDSLLKLRRLYVLHLQDNQFSGSIPPFKQTSLRFFNVSNNRLSGDIPVTPTLVRFNVSSFSGNLELCGEQIQKPCGNVAIAPSSSRSYPQVTGSSSSSRRTKLVKIIAGSVGGFVGLLLIILLLFMICKCRERKSLSEVRNKGIDDEGMRMEEASGISAGGRGGNNGGKQGGFSWESEGLGSLVFCGAGDEKMTYSLEDLLKASAETLGRGTMGSTYKAVMESGYIVTVKRLKDARYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGLTHGNLKSSNVLLGSDFEEEETESGDDPASGNEASEEKLQALLNIAMACVSLMPQNRPMMREVLKMIRDTRAEAQISSNSSDHSPGSWSDIVQSLPRDEHLVSTKQEAEKERADALGSSSSCCSFDRK | 602 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 206335 | 211397 | - | Cp4.1LG01g06220.1 | Cpe01g00029 | 461342 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00029 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 336 | 428 | - | - | |
Cpe01g00029 | 602 | Pfam | Leucine rich repeat N-terminal domain | 26 | 57 | IPR013210 | - | |
Cpe01g00029 | 602 | Gene3D | Ribonuclease Inhibitor | 181 | 229 | IPR032675 | - | |
Cpe01g00029 | 602 | ProSiteProfiles | Protein kinase domain profile. | 353 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00029 | 602 | SUPERFAMILY | Protein kinase-like (PK-like) | 357 | 491 | IPR011009 | - | |
Cpe01g00029 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 429 | 500 | - | - | |
Cpe01g00029 | 602 | MobiDBLite | consensus disorder prediction | 574 | 588 | - | - | |
Cpe01g00029 | 602 | Pfam | Leucine rich repeat | 112 | 171 | IPR001611 | GO:0005515 | |
Cpe01g00029 | 602 | Pfam | Protein kinase domain | 356 | 488 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g00029 | 602 | SUPERFAMILY | L domain-like | 29 | 218 | - | - | |
Cpe01g00029 | 602 | MobiDBLite | consensus disorder prediction | 548 | 565 | - | - | |
Cpe01g00029 | 602 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 493 | 567 | - | - | |
Cpe01g00029 | 602 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 11 | 492 | - | - | |
Cpe01g00029 | 602 | Gene3D | Ribonuclease Inhibitor | 25 | 180 | IPR032675 | - | |
Cpe01g00029 | 602 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 493 | 567 | - | - | |
Cpe01g00029 | 602 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 11 | 492 | - | - | |
Cpe01g00029 | 602 | MobiDBLite | consensus disorder prediction | 548 | 602 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00029 | Cpe-Chr1:206335 | Cpe01g00897 | Cpe-Chr1:5271688 | 4.14E-43 | dispersed | |
Cpe01g00029 | Cpe-Chr1:206335 | Cpe10g00446 | Cpe-Chr10:2605039 | 2.38E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62099 | PF00069 | Pkinase | 2.10E-18 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00029 | - | - | cmax:111483350 | 902.508 |