Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00034 ATGGTTTCAACTCAGAATAACTCATCCATTGATGGAAACCGGAGGCAAGGAGTTTCAGAATTGGAAGTTAGGCCTGGAGGAATGTTTGTTCAAATCAGAGATTTGAATCCAAATCCAAATCCCTCTCCTCCCACCATCGAACTTAAGGTCAAATTTGGGTCTTCTTACCATCACCTTCATATCAGCTCCCATGCAAGCTTCGGTGAATTAAAAAAGATGTTGGCAGAACCAACTGGTTTGCACCCAGAAGAGCAAAAGGTAATATACAAAAACAAAGTGAGGGATTCAAAAAGCTATCTAGATGTGGCAAGACTCAGAAATGGCTCAAAACTTGTGTTGGTTGAAGACACTCTAAGCAAGGAAAGACGATGCCTTGAGATGCTTAAAGATGCAAACTTCCAAAACTCCTCAAAATTGCTAAAACAACTTAGCATGGAAGTGAAAAAGCTGTCTCAAGAGGTTGAATCTCTTCACATGAAAGGTTGTAAGGATGGGAGAGTGTCAGAAACTGAAGTGGAGAATTTGACTGAAATGCTTATGAGACAATTGATTGCGTTGGATGAAATTCAAGTGGTGGGAGACCTGAGGCTGCAAAGAAGAGAACAGGTGAGGGAAGTTCAAAAGCAAATACAAAGCCTTGACATGATGAAGCTGCAACTCTGCAGCAATGGAGGTGGAGACTCACATAATGCCCATGCTTTTACTTCCACCAATGCAAAGGGAAACCAAAGGTTGCACCCAAAGCTGCAGTGTACCAGCATGGTGAAGGAAGCTCTAAGGAATTCTGAATCGCTGAAGATGGTTGACAAGGAATTTTTCACCGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTTATAGGCAAAGGGAGCTATGGGGTTGTTGCATCTGCCATAGACACTCACTCTGGCGAGAAAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCGGATGCTACACGGATTCTTAGAGAAATTAAGCTCCTCCGTTTTCTTCGGCATCCTGATATTGTTGACATAAAACATATAATACTCCCTCCTTCCAGAAGGGAGTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTCCGACCTTCATCATGTACTCAAAGCTAATGATGATCTCACCCCTCAACATCATCAATTTTTCTTGTATCAACTTCTTAGAGCCTTGAAGTATATACATTCAGCACATGTGTTCCATAGAGATTTGAAGCCAAAGAATATACTTGCCAATGCAGACTGCAAACTGAAGATCTGTGACTTTGGGCTTGCTCGTGCATCTTTTACTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGCTCCTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTCGCTGAAATGTTGGCAGGCAAGCCATTGTTTCCTGGGAATAGTGTTGTGCATGAGCTGGATCTAATAACTGATTTACTTGGTACTCCTTCGGCTGAATGCATTGCTAAGATTCGTAATGAAAAGGCTAAAAGATACTTGAATAGCATGAAAAAAAAGCACCCTATTCCGCTGTCAAGAAAGTTCCCTAATGCAGATCCACTTGCTCTTCATTTACTTGAGCGTCTGCTTGCATTTGATCCGGAGGATCGTCCTTCTGCTGAGGAGGCATTAGCTGATCCATATTTCCATGGGCTTGCAAATGTGGAGGATGAACCATCGAGGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTAACCAAAAATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTATCATCCTCAAATGCTACAGGAATACCTTCAAGGTTCTGAGAGTCACTTCTTGTATCCCAGTGGAATTGATCAATTCAAGCGTCAATTTGATCATCTGGAGGAACACTCTGGTAAAGGTGAGAGAGGCAGTCCGCTCCTGAGGAAGTATGTCTCCTTGCCTAGGGAGCGAATCTGTACACCAAGAGATGAAGATGATGATAATTGTAAAACAGAACAGAATGCAACTTCAGCAGAACCTGCAGCGCTTCAAAGCACTCCTGGACCTGGTTATTCATTAACTGCTCTGAATGGTTCTGTTCAAGTAGACTGCAGCAATTACAACCTGTTGAGGAGTGCAAGTATTAGTTGCTCAAAATGGGTGGATTAA 2214 41.6 MVSTQNNSSIDGNRRQGVSELEVRPGGMFVQIRDLNPNPNPSPPTIELKVKFGSSYHHLHISSHASFGELKKMLAEPTGLHPEEQKVIYKNKVRDSKSYLDVARLRNGSKLVLVEDTLSKERRCLEMLKDANFQNSSKLLKQLSMEVKKLSQEVESLHMKGCKDGRVSETEVENLTEMLMRQLIALDEIQVVGDLRLQRREQVREVQKQIQSLDMMKLQLCSNGGGDSHNAHAFTSTNAKGNQRLHPKLQCTSMVKEALRNSESLKMVDKEFFTEYGEATQYEIEEVIGKGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHIILPPSRREFKDLYIVFELMESDLHHVLKANDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGNSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLNSMKKKHPIPLSRKFPNADPLALHLLERLLAFDPEDRPSAEEALADPYFHGLANVEDEPSRQPISKLEFEFERRKLTKNDVRELIYREILEYHPQMLQEYLQGSESHFLYPSGIDQFKRQFDHLEEHSGKGERGSPLLRKYVSLPRERICTPRDEDDDNCKTEQNATSAEPAALQSTPGPGYSLTALNGSVQVDCSNYNLLRSASISCSKWVD 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 232257 238522 + Cp4.1LG01g06350.1 Cpe01g00034 461347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00034 737 SMART BAG_1 136 217 IPR003103 GO:0051087
Cpe01g00034 737 ProSiteProfiles Ubiquitin domain profile. 46 114 IPR000626 GO:0005515
Cpe01g00034 737 ProSitePatterns Protein kinases ATP-binding region signature. 288 312 IPR017441 GO:0005524
Cpe01g00034 737 Gene3D - 45 115 - -
Cpe01g00034 737 MobiDBLite consensus disorder prediction 1 22 - -
Cpe01g00034 737 MobiDBLite consensus disorder prediction 1 15 - -
Cpe01g00034 737 Gene3D Transferase(Phosphotransferase) domain 1 368 596 - -
Cpe01g00034 737 Pfam Protein kinase domain 282 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00034 737 CDD STKc_TDY_MAPK 281 618 - -
Cpe01g00034 737 Pfam Ubiquitin family 49 114 IPR000626 GO:0005515
Cpe01g00034 737 SUPERFAMILY Ubiquitin-like 39 118 IPR029071 -
Cpe01g00034 737 MobiDBLite consensus disorder prediction 688 704 - -
Cpe01g00034 737 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 246 696 - -
Cpe01g00034 737 Gene3D BAG domain 116 221 IPR036533 GO:0051087
Cpe01g00034 737 Pfam BAG domain 143 215 IPR003103 GO:0051087
Cpe01g00034 737 Gene3D Phosphorylase Kinase; domain 1 298 619 - -
Cpe01g00034 737 SMART serkin_6 282 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00034 737 ProSitePatterns MAP kinase signature. 317 420 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe01g00034 737 SUPERFAMILY BAG domain 101 217 IPR036533 GO:0051087
Cpe01g00034 737 MobiDBLite consensus disorder prediction 675 704 - -
Cpe01g00034 737 Coils Coil 133 160 - -
Cpe01g00034 737 ProSiteProfiles BAG domain profile. 146 217 IPR003103 GO:0051087
Cpe01g00034 737 SUPERFAMILY Protein kinase-like (PK-like) 279 579 IPR011009 -
Cpe01g00034 737 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 246 696 - -
Cpe01g00034 737 ProSiteProfiles Protein kinase domain profile. 282 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00034 Cpe-Chr1:232257 Cpe04g01376 Cpe-Chr4:11169248 0 dispersed
Cpe04g01090 Cpe-Chr4:9489949 Cpe01g00034 Cpe-Chr1:232257 2.91E-07 dispersed
Cpe20g00549 Cpe-Chr20:3218428 Cpe01g00034 Cpe-Chr1:232257 1.55E-28 dispersed
Cpe01g00034 Cpe-Chr1:232257 Cpe01g00906 Cpe-Chr1:5334482 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62100 PF00069 Pkinase 2.10E-67 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00034 - - csv:101204645 824.313