Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00045 | ATGGAAGAGGAAAAGGTCAAGCTTCTTCTATATGAAGATTATTTACAATTTTATAAATATTACAAATCTCTTCCTCTGTTCCGTTGTCTGTATTTCGATTCTCTTCTCAAAATCTTCGACGACAAGGGGAAGTGTTCAAGAGCATGCGAAGATTTTGAAATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTCTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACACTCTCAATTACGGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCGAAGGGTTGTGTGGTGAAAAGGGTCCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATCCAAGACATGACTCTCAGACTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGA | 681 | 43.17 | MEEEKVKLLLYEDYLQFYKYYKSLPLFRCLYFDSLLKIFDDKGKCSRACEDFEMSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRSNNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 297361 | 299241 | + | Cp4.1LG01g06090.1 | Cpe01g00045 | 461358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00045 | 226 | PRINTS | C2 domain signature | 77 | 89 | IPR000008 | - | |
Cpe01g00045 | 226 | PRINTS | C2 domain signature | 101 | 114 | IPR000008 | - | |
Cpe01g00045 | 226 | PRINTS | C2 domain signature | 122 | 130 | IPR000008 | - | |
Cpe01g00045 | 226 | CDD | C2_ArfGAP | 59 | 203 | - | - | |
Cpe01g00045 | 226 | Pfam | C2 domain | 60 | 147 | IPR000008 | - | |
Cpe01g00045 | 226 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 55 | 155 | IPR035892 | - | |
Cpe01g00045 | 226 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 54 | 218 | IPR044562 | - | |
Cpe01g00045 | 226 | Gene3D | C2 domain | 44 | 214 | IPR035892 | - | |
Cpe01g00045 | 226 | ProSiteProfiles | C2 domain profile. | 41 | 161 | IPR000008 | - | |
Cpe01g00045 | 226 | SMART | C2_3c | 60 | 157 | IPR000008 | - | |
Cpe01g00045 | 226 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 54 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00045 | Cpe-Chr1:297361 | Cpe09g01112 | Cpe-Chr9:9578261 | 3.29E-67 | dispersed | |
Cpe01g00045 | Cpe-Chr1:297361 | Cpe01g01844 | Cpe-Chr1:15729256 | 3.84E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00045 | - | - | csv:101205028 | 315.079 |