Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00084 ATGCGAGCATTGTTGAAGATGAAACGGCTGCTTGAGCTCTTTGTGTTGTTCGTTTTGGCTCCACTCTGTGCGAGATGTCTAAACCTATCTCTAAACGACGACGTTTTGGGCCTGATAGTGTTTAAAGCCGCTGTTGAAGATCCAAAGCAGAACCTCGCGACCTGGGACGAAGATGACGATAGTCCCTGCAACTGGACTGGTGTTCAATGCAGTCCCAGATCCAAACGGGTTGTCGAGCTCAACCTCGATGGATTCTCTCTCTCGGGTCGGCTCGGTCGAGGGCTTTTCCAGTTGGAGTTTCTGCAGAGATTGTCGTTATCAAAGAACAATCTCAGTGGAAATTTAAGCCCCAATTTTGCTCGTGTGGATAATCTTCAGGTGATTGATTTGAGCGGGAATAATTTGTCTGGAACTGTTCCAGATGATTTTTTCCGTCAATGTGGGTCTTTGAGAGTTGTTTCTTTGGCCAACAACAAATTTGATGGGAAAGTTCCTGATAGTTTGAGCTCGTGTGGGAGTCTTATTGCTGTTAACTTGTCCTCGAATCAGTTTTCGGGTCCTTTGCCCTCTGGGATTTTGTCTCTCAGTGGGCTTCGATCATTGGACTTGTCTGATAATGCTCTGGTGGGTGAAATTCCGAAGGTAATTGAGAATTTATATAACCTGCGGACTCTTAACTTGAGGAAGAATCGATTTTCTGCACAGATTCCTGATGGTATTGGCAGCTGCTTGCTTCTGAGGTCCATTGATCTTAGCGAGAATTCATTCTCTGGGAACCTTCCTCAGACTATGCAGAAACTTGTTCTTTGTAGTGATCTGATTTTGAGCAGGAATTTGTTCGAAGGAAATGTTCCAGAGTGGATAGGAGAAATGAAAGGCCTTGAAACTCTGGACTTTTCTGGGAACAATTTCACTGGTCATATTCCAACTACAATGGGGAATCTTCAATATCTAAAAGTATTAAATCTCTCTTCAAATGGCTTTACTGATAGCTTTCCAGAATCTGTGATGAAATGCCAAAACCTTCTGGCAATAGATATCAGTCATAATTTCATCATGGGTAATCTTCAAGCGATTGGAAGTTTAGCGAAGCTGCAGTTTCTGAACCTGTCTGGGAATTCTTTTGTTGGACCTATTCCAGAAACTATTGGAGATCTGAAAGCTTTGAGCGTTCTTGATTTGAGCAGAAATCGTCTGAATGAAAGCATTCCCGAAGCGATTGGAGGAGCTGTGTCCCTAATGGAACTGAAGCTGGATGAAAATTTTCTAGGGGGTGAACTTCCCTCTTCAATTGGTCACTGTTCTTCCCTTACAACTTTGTTCACATCGCACAATAACTTAACTGGCCCGATACCTGTGGAGTTAGCTAAACTCACTTATCTCCGAAATCTCGACTTATCCTTTAACAACCTCAATGGAACTCTTCCAAAGCAGTTGTCTAATCTTCCAAACCTTCTTTTGTTCAATATTTCTCATAACGACCTCAAGGGTGAGCTGCCTGGTGGTGTATTCTTTAACACCATCTCCCCTTCATCCGTAGCTGGAAATCCATCCCTTTGTGGCTCTGTCGTTAATAAGTCTTGCCCTTCTGTTCTTCCAAAACCTATTGTGCTTGATCCCAACTCCACTTCAGATTCCATTTCCAGCTCACTGCCTCCAAGTACTAATCTCAGAAGAAATAGAAATATCCTCAGCATTTCTGCACTGGTTGCCATTGGCGCCGCTGCTTTCATCATCATAGGCATCATATTGATCACCATCCTCAACAGTCGTGTTCAACCGCCCACGTCTTCTTTGTCTGCAGCTGCACTTGCATTGTCCATAGGGGATGATTTCAGTCATTCCTCCAGCCCTGATGCGAATTCGGGAAAGCTTGTGGTGTTGTCAGGAGAGCTTGACTTTAGCGCAGGAGCACATGCCCTGCTGAACAAGGATTGTGAGCTCGGGTGCGGTGGGTTTGGAGCAGTTTACCATACCGTTCTGCGGGATGGACACTCTGTTGCAATCAAGAAGCTCACAGTTTCTAGCCTCGTCAAGTCCCAAGAAGATTTCGAGAGGGAAGTTAGGAAGTTTGGGAATGTCAGGCACCAAAATCTGGTGACACTCGAAGGCTATTATTGGACTCCGTCGCTACAGCTCCTTATATACGAATATGTCTCTGGAGGTAGCTTGTATGGACTGCTACATGAAGCATCGGATGACAATGTCCTGCCATGGAATGAGAGGTTCAACATAATTCTCGGCACAGCAAAAGGACTGGCTCACTTACACCAATCAAACACAATCCACTATAACATAAAATCCAGCAATATTCTTATTGATTGCAATGGTCATCCTAAGGTGGGAGACTATGGTCTAGCAAGATTGCTCCCAATGTTAGACCGTTATGTTTTAAGCAGCAAGATCCAGAGTGCGCTCGGTTACATGGCACCAGAGTTCGCTTGCAGGACAGTGAAGATAACTGAAAAATGCGACATGTACGCCTTTGGTATCTTGATTCTGGAGATAGTTACAGGAAAGAGGCCTGTCGAGTACATGGAAGACGACGTAGCAGTCCTCTGTGACATGGTCAGAGTAGCAGTGGACGAAGGAAGAGCCGAAGAATGCATCGACAGTAAGCTGAGGGGGAATTTCCCAGCCGAAGAGGCCGTTCCCGTATTAAAATTAGGCTTGATCTGCACCTCCCACGTGCCATCAAACCGACCCGAAATGAGAGAAATGGTCAAGATACTGGAGATGATCAAATGCCCATCCGAATTACAAGAGTTGGGATAA 2775 44.86 MRALLKMKRLLELFVLFVLAPLCARCLNLSLNDDVLGLIVFKAAVEDPKQNLATWDEDDDSPCNWTGVQCSPRSKRVVELNLDGFSLSGRLGRGLFQLEFLQRLSLSKNNLSGNLSPNFARVDNLQVIDLSGNNLSGTVPDDFFRQCGSLRVVSLANNKFDGKVPDSLSSCGSLIAVNLSSNQFSGPLPSGILSLSGLRSLDLSDNALVGEIPKVIENLYNLRTLNLRKNRFSAQIPDGIGSCLLLRSIDLSENSFSGNLPQTMQKLVLCSDLILSRNLFEGNVPEWIGEMKGLETLDFSGNNFTGHIPTTMGNLQYLKVLNLSSNGFTDSFPESVMKCQNLLAIDISHNFIMGNLQAIGSLAKLQFLNLSGNSFVGPIPETIGDLKALSVLDLSRNRLNESIPEAIGGAVSLMELKLDENFLGGELPSSIGHCSSLTTLFTSHNNLTGPIPVELAKLTYLRNLDLSFNNLNGTLPKQLSNLPNLLLFNISHNDLKGELPGGVFFNTISPSSVAGNPSLCGSVVNKSCPSVLPKPIVLDPNSTSDSISSSLPPSTNLRRNRNILSISALVAIGAAAFIIIGIILITILNSRVQPPTSSLSAAALALSIGDDFSHSSSPDANSGKLVVLSGELDFSAGAHALLNKDCELGCGGFGAVYHTVLRDGHSVAIKKLTVSSLVKSQEDFEREVRKFGNVRHQNLVTLEGYYWTPSLQLLIYEYVSGGSLYGLLHEASDDNVLPWNERFNIILGTAKGLAHLHQSNTIHYNIKSSNILIDCNGHPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDMYAFGILILEIVTGKRPVEYMEDDVAVLCDMVRVAVDEGRAEECIDSKLRGNFPAEEAVPVLKLGLICTSHVPSNRPEMREMVKILEMIKCPSELQELG 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 504888 513597 + Cp4.1LG01g05760.1 Cpe01g00084 461397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00084 924 SUPERFAMILY Protein kinase-like (PK-like) 646 912 IPR011009 -
Cpe01g00084 924 Gene3D Ribonuclease Inhibitor 317 532 IPR032675 -
Cpe01g00084 924 SUPERFAMILY L domain-like 32 267 - -
Cpe01g00084 924 Pfam Protein tyrosine and serine/threonine kinase 644 911 IPR001245 GO:0004672|GO:0006468
Cpe01g00084 924 Gene3D Transferase(Phosphotransferase) domain 1 719 922 - -
Cpe01g00084 924 Gene3D Phosphorylase Kinase; domain 1 635 718 - -
Cpe01g00084 924 Gene3D Ribonuclease Inhibitor 32 312 IPR032675 -
Cpe01g00084 924 SMART LRR_typ_2 195 218 IPR003591 -
Cpe01g00084 924 SMART LRR_typ_2 482 506 IPR003591 -
Cpe01g00084 924 SMART LRR_typ_2 291 315 IPR003591 -
Cpe01g00084 924 SMART LRR_typ_2 386 410 IPR003591 -
Cpe01g00084 924 SMART LRR_typ_2 122 146 IPR003591 -
Cpe01g00084 924 SMART LRR_typ_2 219 243 IPR003591 -
Cpe01g00084 924 SMART LRR_typ_2 458 481 IPR003591 -
Cpe01g00084 924 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Cpe01g00084 924 SMART LRR_sd22_2 98 127 - -
Cpe01g00084 924 SMART LRR_sd22_2 195 221 - -
Cpe01g00084 924 SMART LRR_sd22_2 458 484 - -
Cpe01g00084 924 SMART LRR_sd22_2 386 405 - -
Cpe01g00084 924 SUPERFAMILY L domain-like 197 531 - -
Cpe01g00084 924 ProSitePatterns Protein kinases ATP-binding region signature. 648 671 IPR017441 GO:0005524
Cpe01g00084 924 ProSiteProfiles Protein kinase domain profile. 642 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00084 924 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 8 356 - -
Cpe01g00084 924 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 357 916 - -
Cpe01g00084 924 PRINTS Leucine-rich repeat signature 125 138 - -
Cpe01g00084 924 PRINTS Leucine-rich repeat signature 386 399 - -
Cpe01g00084 924 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Cpe01g00084 924 Pfam Leucine rich repeat 317 374 IPR001611 GO:0005515
Cpe01g00084 924 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 357 916 - -
Cpe01g00084 924 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 356 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00084 Cpe01g00963 CCT
Cpe01g00084 Cpe01g00963 ECH
Cpe01g00963 Cpe01g00084 ECH
Cpe01g00084 Cpe13g01035 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00084 Cpe-Chr1:504888 Cpe13g01035 Cpe-Chr13:8499842 0 dispersed
Cpe01g00084 Cpe-Chr1:504888 Cpe01g00963 Cpe-Chr1:5707041 0 wgd
Cpe01g00084 Cpe-Chr1:504888 Cpe03g00011 Cpe-Chr3:53564 0 wgd
Cpe01g00084 Cpe-Chr1:504888 Cpe08g01262 Cpe-Chr8:9123959 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62102 PF07714 PK_Tyr_Ser-Thr 1.70E-40 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00084 - - csv:101217762 1523.45