Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00091 TGCAAGCTCCTAAGAAGAAGATGTGGTCAACAATGTCCCTTCGCCCCATACTTCTCCCCCCACGAGCCTCACAAGTTCGCCTCGGTCCACAAGGTCTTCGGCGCCAGCAATGTCTCCAAGATGCTCAAGGAAGTTCCGAAAAATGAAAGAGATAATACTGCGAATAGTCTAATTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTGTATGGCTGCATGGGCGCCATTTCATGTCTACAACACCAAGTCCAAGCGTTACAAGCTACACTCACTGCAGTTAGAGCTGAGATACTGAGATGCAAATATAGACAAGGTAATATGGTTTCCATTGCCCTACCACCACCGCCACCGCCGCCTCCCGAGCTACCTCCGCCGCCTCTTCAGGATGCTTCTTCCTCTTCCTCCACCTTGTACAACCGGCCCACGGTGGCCGCTGATTCATCCTTTTTCGCATTTTAG 459 50.54 CKLLRRRCGQQCPFAPYFSPHEPHKFASVHKVFGASNVSKMLKEVPKNERDNTANSLIYEANVRLRDPVYGCMGAISCLQHQVQALQATLTAVRAEILRCKYRQGNMVSIALPPPPPPPPELPPPPLQDASSSSSTLYNRPTVAADSSFFAF 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 546748 547282 - Cp4.1LG01g05690.1 Cpe01g00091 461404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00091 152 MobiDBLite consensus disorder prediction 109 139 - -
Cpe01g00091 152 MobiDBLite consensus disorder prediction 110 127 - -
Cpe01g00091 152 Pfam Lateral organ boundaries (LOB) domain 1 93 IPR004883 -
Cpe01g00091 152 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 1 143 - -
Cpe01g00091 152 ProSiteProfiles LOB domain profile. 1 97 IPR004883 -
Cpe01g00091 152 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 143 - -
Cpe01g00091 152 Coils Coil 76 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00091 Cpe-Chr1:546748 Cpe13g01047 Cpe-Chr13:8546645 4.65E-59 dispersed
Cpe01g00091 Cpe-Chr1:546748 Cpe01g00996 Cpe-Chr1:5909954 4.04E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48718 PF03195 LOB 1.50E-36 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00091 - - cmax:111485427 271.166