Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00122 ATGTGCGCAGTTGCAGTGCCGAAGACGACGACGACGATGACGAATTCATTATTCTCATCTCCAAAAATTGCTTCACTACTCTACAAGTCCTCGCTGAATTATTGTTGTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCGAGATCGGTGTCCAGTCCTAGGAAGCTTCATGTTTCTGCTTCCTCACCGTCGCTGTTGCCATCGACGCCGCAACTTCCGCCTTCTGTTTCGCCGTTGGCTGTTGATACGGTTTTGAAGAGGAAGAGGCCGGCAAGGATCAATGTTACGCAGTCGATTGATTTTATTGGATTTGGATTTGAGCAACCGGAGGTGATGGAGGAGGAAGAGGAAGAATACTCGGTTTATTGTAAAAGAGGAAGAAGACGCATCGCCGTGGAGGATCGATTCTCAGCCACTGTTGGAATTCAAGGAGATTCTCGACAGGCTTTTTTCGGAGTTTACGACGGGCATGGCGGAGCAAAAGTGGCGGAAATCGCAGCGAAAAGAATGAGCGAGAACGTGATCGATCAAGTGACGAGAAGAACCGATTCGGAACTTGAGGAAGCAATCAAAGACGGCTATCTCGCCACCGATCGGGAAGTATCAGAGGAAGGCGTCAGTGGCGGAGCCTGTTGCGTGGCCGCATTGATTCGGAACGGAAATCTCGCAGTCTCGAACGTCGGCGATTGTCGTGCCGTGTTGAGCCGAAGGGGAAAAGCCGAAGCCCTAACCTCGGATCACCGCCCGTGCAGAGAAGACGAGAGAAACCGGATCGAAAATTTGGGCGGTTACGTAGACTATTGTCGTGGTGCGTGGAGAGTTCAAGGAACATTAGCTGTATCGCGAGCCATTGGAGACGATCATCTGAAACAGTGGGTGATATCGGAACCAGAGACGAGAATGGTGAAGATTGAGGACGATTGTGATTTCTTGATCCTTGCTTCTGATGGATTTTGGGACAAGGTTAAAAATCAGGAAGCAGTAGACATAGTACAGAGCCTTTGCGGCGTAGAGATGGAGAAGCCAAAGCTATTCGCAGCCTGCAAAGAGCTAGCCGCCTTGTCAACATCACGAGGCTCAGTGGACGACACCACTGTTATGATCATCAAATTGTCCTCATTTCTCTGA 1134 49.56 MCAVAVPKTTTTMTNSLFSSPKIASLLYKSSLNYCCSSPSSSSSSSSSPRSVSSPRKLHVSASSPSLLPSTPQLPPSVSPLAVDTVLKRKRPARINVTQSIDFIGFGFEQPEVMEEEEEEYSVYCKRGRRRIAVEDRFSATVGIQGDSRQAFFGVYDGHGGAKVAEIAAKRMSENVIDQVTRRTDSELEEAIKDGYLATDREVSEEGVSGGACCVAALIRNGNLAVSNVGDCRAVLSRRGKAEALTSDHRPCREDERNRIENLGGYVDYCRGAWRVQGTLAVSRAIGDDHLKQWVISEPETRMVKIEDDCDFLILASDGFWDKVKNQEAVDIVQSLCGVEMEKPKLFAACKELAALSTSRGSVDDTTVMIIKLSSFL 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 697885 701058 - Cp4.1LG01g05320.1 Cpe01g00122 461435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00122 377 Pfam Protein phosphatase 2C 141 365 IPR001932 -
Cpe01g00122 377 Gene3D - 112 376 IPR036457 -
Cpe01g00122 377 MobiDBLite consensus disorder prediction 39 68 - -
Cpe01g00122 377 CDD PP2Cc 121 373 IPR001932 -
Cpe01g00122 377 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Cpe01g00122 377 PANTHER PROTEIN PHOSPHATASE 2C 16 376 IPR015655 GO:0004722|GO:0006470
Cpe01g00122 377 MobiDBLite consensus disorder prediction 39 74 - -
Cpe01g00122 377 SMART PP2C_SIG_2 129 373 IPR001932 -
Cpe01g00122 377 SMART PP2C_4 111 371 IPR001932 -
Cpe01g00122 377 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 16 376 - -
Cpe01g00122 377 ProSiteProfiles PPM-type phosphatase domain profile. 120 373 IPR001932 -
Cpe01g00122 377 SUPERFAMILY PP2C-like 120 374 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00122 Cpe01g01028 CCT
Cpe01g00122 Cpe01g01028 ECH
Cpe01g01028 Cpe01g00122 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00122 Cpe-Chr1:697885 Cpe02g01187 Cpe-Chr2:10796079 1.57E-119 dispersed
Cpe01g00122 Cpe-Chr1:697885 Cpe01g01028 Cpe-Chr1:6082343 0 wgd
Cpe01g00122 Cpe-Chr1:697885 Cpe20g00876 Cpe-Chr20:7869092 1.88E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00122 K17506 - csv:101208170 474.552