Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00138 ATGGTTTCCATATATCGTGATCGGACGTCGGAGTTTCGGTCGCTGTCGGATACGTTGAGGAAGATTGCCGGAGTCACAGCCGACGTCCATCCAGTTCAAAATGAACCATCGGCGTCAGTACTCTCCGGATCACCGGGCTTTGCACGGTCTGAATTCAGCAGGAAGGCATCTCTTATCGGCTGGGGTATCCAAGAAGCCTCTCAGAAGATCGCGAGGCTTGCTCAGTTAGCAAAAAGATCATCGATGTTTGATGATCCAATCAGGGAAATCCAGGAAATGACTGCTTTGATTAAGAATGATATTACATCATTGAATGTAGCTATCTCAGATTTGCAAGCCATCCAAACGATGGAGATAGCAGAGGGGAATTATTCTGAGGACAGAGTGGTTCATTCAACCGCTGTCTGTGATGACCTTAAGAGTAAACTTATGGGAGCTACAAAACAACTTCAAGATGTGTTAAATGCAAGAACAGAGAATATCAAGGCCAATGAGAGCCGGAGACAAATATTCTCTGCAAATGCAACCAGAGAAAGTCCTTTTCAAAATCAAGCTAAAACTGTAACTCAACCTCCACCTTGGTTAAGTAATACATCTGAAAGTGATCAATCATCCTTACGAAGGCTAGCTGTGGAGGTCACCCCATCACAGCAAATGGAGATGTCAATGTTACAGCAGGTGGTTCCTAGGCAGGAAAACTATTTACAAAGTCGGGCAGGTGCTCTCCACAATGTGGAATCCACCATCTCAGAACTGGGTGGAATTTTTACACATCTTGCCACAATGGTAGCACATCAAGGAGAACTTGCTATCAGGATTGATGACAACATGGATGAATCAATGGCGAATGTAGAAGGTGCTCGAACCTCTCTCTTTAGGCATCTTAACCAGATATCATCAAACAGATGGCTTCTTATCAAAATATTTGTTATTCTAATAATTTTCTTGATGCTCTTTATTTTCTTGGCATAA 972 43.0 MVSIYRDRTSEFRSLSDTLRKIAGVTADVHPVQNEPSASVLSGSPGFARSEFSRKASLIGWGIQEASQKIARLAQLAKRSSMFDDPIREIQEMTALIKNDITSLNVAISDLQAIQTMEIAEGNYSEDRVVHSTAVCDDLKSKLMGATKQLQDVLNARTENIKANESRRQIFSANATRESPFQNQAKTVTQPPPWLSNTSESDQSSLRRLAVEVTPSQQMEMSMLQQVVPRQENYLQSRAGALHNVESTISELGGIFTHLATMVAHQGELAIRIDDNMDESMANVEGARTSLFRHLNQISSNRWLLIKIFVILIIFLMLFIFLA 323
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 799506 802415 - Cp4.1LG01g05100.1 Cpe01g00138 461451
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00138 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 232 294 IPR000727 -
Cpe01g00138 323 Pfam SNARE domain 269 320 IPR000727 -
Cpe01g00138 323 MobiDBLite consensus disorder prediction 173 202 - -
Cpe01g00138 323 Coils Coil 136 156 - -
Cpe01g00138 323 PANTHER SYNTAXIN 4 322 IPR045242 -
Cpe01g00138 323 SMART tSNARE_6 227 294 IPR000727 -
Cpe01g00138 323 CDD SNARE_syntaxin5 235 320 - -
Cpe01g00138 323 ProSitePatterns Syntaxin / epimorphin family signature. 238 277 IPR006012 GO:0005484|GO:0006886|GO:0016020
Cpe01g00138 323 Gene3D - 48 287 - -
Cpe01g00138 323 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
Cpe01g00138 323 PANTHER SYNTAXIN-31 4 322 - -
Cpe01g00138 323 SUPERFAMILY t-snare proteins 48 287 IPR010989 GO:0016020|GO:0016192
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe01g00138 Cpe01g01046 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00138 Cpe-Chr1:799506 Cpe11g00567 Cpe-Chr11:3361050 4.76E-84 dispersed
Cpe01g00138 Cpe-Chr1:799506 Cpe01g01046 Cpe-Chr1:6186927 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00138 K08490 - csv:101213786 473.011