Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00140 ATGGAGGGAAAGGAAGAAGATGTACGATTGGGAGCCAACAAGTTCAACGAGAGGCAGCCCATTGGAACGGCGGCGCAGAGCCAAGACGATGGCAAAGACTACAAGGAGCCACCGCCGGCGCCGTTATTCGAGCCAGGGGAGCTGACCTCGTGGTCGTTTTACAGAGCTGGAATCGCGGAGTTCTTCGCGACTTTCCTCTTCCTTTACATAACCGTTTTGACGGTCATGGGCGTGGTTCGGTCCAATGAAGCCAACGGCAACACGTGTAAGACCGTTGGAATTCAGGGCATTGCTTGGGCTTTTGGTGGTATGATTTTTGCGTTGGTTTACTGCACCGCTGGGATCTCCGGTGGCCACATCAACCCGGCGGTGACTTTTGGGCTGTTTCTGGCGAGGAAACTGTCGTTGACCAGGGCCATTTTCTATATGGTGATGCAGTGCCTTGGCGCCATCTGCGGCGCGGGTGTTGTGAAGGGGTTCCAACCCAAGCCGTACGACAGGCTCGGCGGTGGAGCCAACGTGGTCAGCAAGGGATACACCAAAGGAGACGGCCTCGGCGCGGAGATCGTCGGTACCTTTATCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGTAGCGCCAGAGACTCGCATGTTCCAATTTTGGCACCGCTACCAATTGGGTTTGCAGTGTTCTTAGTTCACTTGGCTACCATTCCGATCACCGGCACCGGCATCAACCCTGCTCGGAGTTTGGGAGCTGCCATCATCTACAACAACGAGAAAGCCTGGGATGACCACGTGGTGGATTTTCTGGGTTGGACCGTTCATTGGAGCAGGATTGGCAGCTTTGTACCACCAGGTGGTGATCAGAGCCATACCCTTCAAGTCCAAGTGAAGATTTTCAGATTATGGTTAAATAATAATGCCTTTGTTCATCATCAATCAATTGTCGAAATCCGGATTGAATTTTATGCCTACCTCTTTATGATCTATGTTTTTGTATGA 993 52.27 MEGKEEDVRLGANKFNERQPIGTAAQSQDDGKDYKEPPPAPLFEPGELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFQPKPYDRLGGGANVVSKGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNNEKAWDDHVVDFLGWTVHWSRIGSFVPPGGDQSHTLQVQVKIFRLWLNNNAFVHHQSIVEIRIEFYAYLFMIYVFV 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 810724 812738 + Cp4.1LG01g05260.1 Cpe01g00140 461453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00140 330 CDD MIP 55 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 Pfam Major intrinsic protein 47 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 271 IPR034294 -
Cpe01g00140 330 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Cpe01g00140 330 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 PANTHER AQUAPORIN PIP1-2 ISOFORM X2 1 271 - -
Cpe01g00140 330 SUPERFAMILY Aquaporin-like 47 253 IPR023271 -
Cpe01g00140 330 MobiDBLite consensus disorder prediction 1 39 - -
Cpe01g00140 330 TIGRFAM MIP: MIP family channel proteins 59 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00140 330 Gene3D Glycerol uptake facilitator protein. 40 278 IPR023271 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00140 Cpe01g01049 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00140 Cpe-Chr1:810724 Cpe01g01051 Cpe-Chr1:6202540 0 dispersed
Cpe01g01050 Cpe-Chr1:6199962 Cpe01g00140 Cpe-Chr1:810724 4.27E-83 dispersed
Cpe01g00140 Cpe-Chr1:810724 Cpe01g00141 Cpe-Chr1:813316 0 tandem
Cpe01g00140 Cpe-Chr1:810724 Cpe01g01049 Cpe-Chr1:6196921 0 wgd
Cpe01g00140 Cpe-Chr1:810724 Cpe08g01215 Cpe-Chr8:8878269 2.30E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00140 K09872 - csv:101215145 511.916