Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00141 | ATGGAAGGGAAGGAAGAGGATGTAAGGCTCGGAGCCAACAAGTTCAACGAGAGGCAGCCGATTGGAACGGCGGCGCAGAGTCAGGACGATGCTAAGGACTATAAGGAGCCACCACCGGCGCCACTGTTCGAGCCAGAGGAGCTGACTTCTTGGTCCTTTTACAGAGCCGGTATCGCGGAGTTCTTTGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACTGTCATGGGCGTCGTCCGGTCCAATGAAGCCAACGGCAACACGTGCAAGACCGTTGGAATTCAGGGCATCGCTTGGGCTTTTGGTGGTATGATTTTTGCGCTGGTTTATTGCACGGCTGGAATCTCCGGTGGACACATCAACCCAGCGGTGACTTTTGGGCTTTTTCTAGCGAGGAAGCTGTCGTTGACCAGGGCGATTTTCTACATGGTGATGCAGTGCCTAGGAGCCATCTGCGGCGCCGGGGTTGTAAAGGGCTTCCAACCCAAGCCCTACAATAGGCTCGGCGGTGGTGCTAACATGGTCAGCAAAGGGTACACCAAAGGCGATGGCCTCGGTGCCGAGATTGTCGGCACCTTTATCCTTGTTTACACCGTCTTCTCTGCCACCGATGCCAAACGTAGCGCCAGAGACTCCCACGTTCCCATCCTAGCCCCGTTACCAATTGGGTTCGCGGTGTTCTTAGTTCACTTGGCCACCATCCCAATCACCGGCACCGGCATCAACCCAGCCCGGAGCTTGGGTGCTGCCATCATCTACAACAATGACAAAGCCTGGGATGATCACTGGATTTTCTGGGTGGGACCATTCATCGGCGCTGCTCTGGCAGCTCTGTACCACCAAGTTGTGATCAGAGCCATTCCGTTCAAGTCGAAGTGA | 879 | 54.95 | MEGKEEDVRLGANKFNERQPIGTAAQSQDDAKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFQPKPYNRLGGGANMVSKGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNNDKAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 813316 | 815355 | + | Cp4.1LG01g05240.1 | Cpe01g00141 | 461454 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00141 | 292 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 292 | IPR034294 | - | |
Cpe01g00141 | 292 | Pfam | Major intrinsic protein | 47 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
Cpe01g00141 | 292 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | PRINTS | Major intrinsic protein family signature | 138 | 157 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | PRINTS | Major intrinsic protein family signature | 187 | 205 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | PRINTS | Major intrinsic protein family signature | 263 | 283 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | PANTHER | AQUAPORIN PIP1-4-RELATED | 1 | 292 | - | - | |
Cpe01g00141 | 292 | Gene3D | Glycerol uptake facilitator protein. | 40 | 291 | IPR023271 | - | |
Cpe01g00141 | 292 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cpe01g00141 | 292 | SUPERFAMILY | Aquaporin-like | 46 | 285 | IPR023271 | - | |
Cpe01g00141 | 292 | CDD | MIP | 55 | 283 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g00141 | 292 | TIGRFAM | MIP: MIP family channel proteins | 59 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00141 | Cpe01g01051 | CCT | |
Cpe01g00141 | Cpe01g02521 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00141 | Cpe-Chr1:813316 | Cpe01g01051 | Cpe-Chr1:6202540 | 0 | dispersed | |
Cpe01g00140 | Cpe-Chr1:810724 | Cpe01g00141 | Cpe-Chr1:813316 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00141 | K09872 | - | csv:101215145 | 568.926 |