Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00141 ATGGAAGGGAAGGAAGAGGATGTAAGGCTCGGAGCCAACAAGTTCAACGAGAGGCAGCCGATTGGAACGGCGGCGCAGAGTCAGGACGATGCTAAGGACTATAAGGAGCCACCACCGGCGCCACTGTTCGAGCCAGAGGAGCTGACTTCTTGGTCCTTTTACAGAGCCGGTATCGCGGAGTTCTTTGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACTGTCATGGGCGTCGTCCGGTCCAATGAAGCCAACGGCAACACGTGCAAGACCGTTGGAATTCAGGGCATCGCTTGGGCTTTTGGTGGTATGATTTTTGCGCTGGTTTATTGCACGGCTGGAATCTCCGGTGGACACATCAACCCAGCGGTGACTTTTGGGCTTTTTCTAGCGAGGAAGCTGTCGTTGACCAGGGCGATTTTCTACATGGTGATGCAGTGCCTAGGAGCCATCTGCGGCGCCGGGGTTGTAAAGGGCTTCCAACCCAAGCCCTACAATAGGCTCGGCGGTGGTGCTAACATGGTCAGCAAAGGGTACACCAAAGGCGATGGCCTCGGTGCCGAGATTGTCGGCACCTTTATCCTTGTTTACACCGTCTTCTCTGCCACCGATGCCAAACGTAGCGCCAGAGACTCCCACGTTCCCATCCTAGCCCCGTTACCAATTGGGTTCGCGGTGTTCTTAGTTCACTTGGCCACCATCCCAATCACCGGCACCGGCATCAACCCAGCCCGGAGCTTGGGTGCTGCCATCATCTACAACAATGACAAAGCCTGGGATGATCACTGGATTTTCTGGGTGGGACCATTCATCGGCGCTGCTCTGGCAGCTCTGTACCACCAAGTTGTGATCAGAGCCATTCCGTTCAAGTCGAAGTGA 879 54.95 MEGKEEDVRLGANKFNERQPIGTAAQSQDDAKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFQPKPYNRLGGGANMVSKGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNNDKAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 813316 815355 + Cp4.1LG01g05240.1 Cpe01g00141 461454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00141 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 292 IPR034294 -
Cpe01g00141 292 Pfam Major intrinsic protein 47 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Cpe01g00141 292 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 PANTHER AQUAPORIN PIP1-4-RELATED 1 292 - -
Cpe01g00141 292 Gene3D Glycerol uptake facilitator protein. 40 291 IPR023271 -
Cpe01g00141 292 MobiDBLite consensus disorder prediction 1 39 - -
Cpe01g00141 292 SUPERFAMILY Aquaporin-like 46 285 IPR023271 -
Cpe01g00141 292 CDD MIP 55 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe01g00141 292 TIGRFAM MIP: MIP family channel proteins 59 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00141 Cpe01g01051 CCT
Cpe01g00141 Cpe01g02521 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00141 Cpe-Chr1:813316 Cpe01g01051 Cpe-Chr1:6202540 0 dispersed
Cpe01g00140 Cpe-Chr1:810724 Cpe01g00141 Cpe-Chr1:813316 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00141 K09872 - csv:101215145 568.926