Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00170 | ATGACAGGGCTTACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCGGTGCCTGCAAGTTTCTTAGACGAAAATGTAGTAATCACTGTGTTTTTGCTCCTTTCTTCACCTATGATGAAGCTACTTCCCACTTTGCTGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTGCACCTCCCCATGCACATCCGAAGCCACGCTGCGATTACTGTTGCTTATGAAGCTCTCGAGCGCATGCGAGATCCTACTTATGGTTGTGTTGCACATATCTTCGCGTTGCAACAAGAGATCGTGAGTTTGCAAGAAGAGATAGATATGTTAGGGAGCCAAATTGCCAACTTCACTGCCGATATGGACAACGTTGCAGTGGTCGAGAATCCATGTATAGAGCTTCAAGTCTCGAAACAGTTGAATGATTTGGTGATGAACACAAATGATTATCAAAACGAGTTGCTCTCTCAACTACCGACTTTTGATGAAGTCGAAACTAATGATGCTCAAATGATATCTCCATTGTTTTGTATCGGGGAAGAAGAAGGGTTTTTCGGGTGCAACCCAAATAACGCTATGGAGAATTCAGCCTTTGATGTATCCGTTGATGAAAACTTTGCTTATCTATGGTAG | 639 | 42.57 | MTGLTSSSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIVSLQEEIDMLGSQIANFTADMDNVAVVENPCIELQVSKQLNDLVMNTNDYQNELLSQLPTFDEVETNDAQMISPLFCIGEEEGFFGCNPNNAMENSAFDVSVDENFAYLW | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 957353 | 958165 | - | Cp4.1LG01g04910.1 | Cpe01g00170 | 461483 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00170 | 212 | Coils | Coil | 95 | 115 | - | - | |
Cpe01g00170 | 212 | Pfam | Lateral organ boundaries (LOB) domain | 15 | 112 | IPR004883 | - | |
Cpe01g00170 | 212 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 12 | 160 | - | - | |
Cpe01g00170 | 212 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 33 | 12 | 160 | - | - | |
Cpe01g00170 | 212 | ProSiteProfiles | LOB domain profile. | 14 | 116 | IPR004883 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00170 | Cpe01g01080 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00170 | Cpe-Chr1:957353 | Cpe17g00315 | Cpe-Chr17:2137602 | 9.37E-48 | dispersed | |
Cpe01g00170 | Cpe-Chr1:957353 | Cpe01g01080 | Cpe-Chr1:6370029 | 9.94E-89 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48727 | PF03195 | LOB | 1.30E-32 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00170 | K13945 | - | csv:101204875 | 291.967 |