Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00192 ATGGAGCGTTTTGAAAGGCTTTTTGGAATGGCTAAGCCATATTTGATGGTCATTTTTGTGCAGTTTGGTTATGCTGGAATGACCATTCTTGTTAAGTCTGCCTTGGACAAAGGCATGAGCCCACATGTGTTTGTGGTTTATCGTTATGCTGTTGCTACTCTTGTCATTGCTCCTTTTGCCATTATCTTTGACAGGAAGGCGAGGACCAAGATGAGCTTTTCAATACTCTGCAAGATTGTGTTGATGGGTTTATTGGAGCCAGTGATCGATCAAAACTTGTACACTACTGGTATGAAGCTCACAACAGCAACCTTTTCAGCTGCCATGGGCAATATTCTACCAGCTTTTTCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGATAGTGAGTATTTTGAAAAGGGGAAGCCAAGCAAAGATCTTAGGAACCATAGTGACAGTTGGAGGAGCTATGATTATGACGTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAAGGGAGCCAGCCCTCTGCTTCTTCTGGTGGCTCTGTAACTCACCAGAGCCAACTTAAGGGCTCACTCATGATAGCAGCTGGCTGCATTTGCTGGTCTGCTTTCATCACTCTTCAGGCGATTACATTGAAAGATTACCCGGCCGAGCTGTCGCTTACGGCGTTGATATGTTTGGTGGGCACCATTGGAGGGTCTGGGGTGGCTTGGATCATTGAGAGGGGGAACCCTGCTGCTTGGCTGAACAACACACCAAGAGATACACAAAAGGGTTTTGAAATGGAGGGTTATGGGAGGCTTTTTGAATTGGCTAAGCCATATTTAGTGGTCGTTTTTGTGCAGTTTGGCTATGCTGGAATGACCATTCTTGCTAAGTCTGCCTTGGACAAAGGCATGAGCCCACATGTCTTTGTGGTTTATCGTCATGCTGTTGCTACTCTTGTCATTGCTCCTTTCGCCATCATCTTTGACAGGCCAGTGATCGATCAAAACTTGTACTTTACTGGTATGAAGCTCACAACAGCAACGTTTACAGCAGCCATGTGCAATATTCTACCAGCTTTTTCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAGTATTTTGAAAAGGGGAAGCCAAGCGAAGATCCTAGGAACCATAGTGACAGTTGGAGGAGCTATGATTATGACGTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAAAGGGAGCCAGCCCTCCGCTTCTTCTGGTGGCTCTGCTACTCACCAGAGCCCACTCAAGGGCTCACTCATGATAGCAACTGGCTGCATTTGCTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTGAAAGAGTACCCGGTCGAGCTGTCGCTTACGGCATTGATATGCTTGGTGGGCACCATTGGAGGGTCTGGGGTGGCTTTGATCATTGAGAGGGGGAACCCTGCTGCTTGGGTTTTGCACTTTGACACGTTCAGTCCTTTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGGCTGAGATAATGTTCTTGGGAAGATGCAAGAATGATGCAAGTAATAAAACACACAACGTTCTTGGGCATGATTATTGGCGCAGTGGTCATGATCACTGGCTTGTACCTGGTCTTGTAAATCCCCATCTCAAGAAGGAATAG 1656 46.5 MERFERLFGMAKPYLMVIFVQFGYAGMTILVKSALDKGMSPHVFVVYRYAVATLVIAPFAIIFDRKARTKMSFSILCKIVLMGLLEPVIDQNLYTTGMKLTTATFSAAMGNILPAFSFLMAWACRLEIVSILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKGSQPSASSGGSVTHQSQLKGSLMIAAGCICWSAFITLQAITLKDYPAELSLTALICLVGTIGGSGVAWIIERGNPAAWLNNTPRDTQKGFEMEGYGRLFELAKPYLVVVFVQFGYAGMTILAKSALDKGMSPHVFVVYRHAVATLVIAPFAIIFDRPVIDQNLYFTGMKLTTATFTAAMCNILPAFSFLMAWACRLEKVSILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKGSQPSASSGGSATHQSPLKGSLMIATGCICWSAFITLQAITLKEYPVELSLTALICLVGTIGGSGVALIIERGNPAAWVLHFDTFSPLSMILVAIMSSFILAEIMFLGRCKNDASNKTHNVLGHDYWRSGHDHWLVPGLVNPHLKKE 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1083179 1093208 + Cp4.1LG01g04860.1 Cpe01g00192 461505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00192 551 PANTHER WAT1-RELATED PROTEIN 9 246 IPR030184 GO:0016021|GO:0022857
Cpe01g00192 551 PANTHER WAT1-RELATED PROTEIN 487 513 - -
Cpe01g00192 551 PANTHER WAT1-RELATED PROTEIN 9 246 - -
Cpe01g00192 551 Pfam EamA-like transporter family 12 132 IPR000620 GO:0016020|GO:0016021
Cpe01g00192 551 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cpe01g00192 551 PANTHER WAT1-RELATED PROTEIN 267 487 - -
Cpe01g00192 551 PANTHER WAT1-RELATED PROTEIN 267 487 IPR030184 GO:0016021|GO:0022857
Cpe01g00192 551 PANTHER WAT1-RELATED PROTEIN 487 513 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00192 Cpe01g01103 CCT
Cpe01g01103 Cpe01g00192 ECH
Cpe01g00192 Cpe01g01103 ECH
Cpe01g00192 Cpe13g00840 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00192 Cpe-Chr1:1083179 Cpe01g02280 Cpe-Chr1:19291497 2.10E-71 dispersed
Cpe01g00192 Cpe-Chr1:1083179 Cpe01g01103 Cpe-Chr1:6513013 0 wgd
Cpe01g00192 Cpe-Chr1:1083179 Cpe10g00870 Cpe-Chr10:4902433 1.02E-91 wgd
Cpe01g00192 Cpe-Chr1:1083179 Cpe13g00840 Cpe-Chr13:7414496 2.19E-75 wgd
Cpe01g00192 Cpe-Chr1:1083179 Cpe19g00374 Cpe-Chr19:3365005 7.70E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00192 - - cmos:111458151 454.907