Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00193 ATGATAACATTATCAGATGAGTTAATGCTCTTTGAGATTATGATGAATTGCGATAACATCTCAAGGGTACAAGTCAATGAATGGGAGAAAGAGATCTGTGAGCAGAACTCCTACAGTACTCATCCCGTGTCAATCATTTCCTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGGTGTTTAACTGATGGAGAGATGAACTATGATAGTTCCTCTAGAATTGAAAACAAGCGTGGCCATCAATGGTTTATGGATGGCAGTGCACCAGAGTTATTCAGTAGCAAGAAGCAAGCAATAGAAACTGTAAATACTAGAACTGTTCCAGGCGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAATCAGTTCCTGGGCCCTTCACTGATCGCCTCTTTGGCTCCGAGCCAATACGAACAGTCAATGTGGTTGATAGAAGCATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTTGAGAATCATTTTGCAAACAACCCGTCAGTTGGCTTGTCCATGTCACAATCCATTGAGGATCCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAGGTTAAAGTCAATCAAGTCAGGGACGCTGACATTGGCATGTCTGCCTCTTTGGGACATGCCTATAGCAGCAGGGGTGATGGTACAGTTTCAATGGGTACAGCATTTAAGAAAATTCATGAGAACGCCATATCATTGGGCCAATCTTATAATAGTAGAGATGAGAATAGCATCTCGGTTGGCCCTGCATATCACAAGACAGATGATAGTTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAAATGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCGATGAGTCAGCCTTTTGACAAGGGGGATTACTCTTTTATTTCAATGGGTCAGTCTTATGAGAAGGCAGAAGGCAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCATGAAAATTTTATCTCAATGGGGCCAGCCTATAGTAAGGCAGGTGATACTTTCATTTCAATGGCTTCCCCCTATAATAAGGGAAATGATGATATATCAATGGGTCCAACCTATGACAAGGTGAACTCTGATATTGTACATGTGGGTCCCAAATATGACAAAGCAGATTCTGGTGCTGTGTCTATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGGTTTGATGATGAGAATGCGGCAGATAATCCATCTGGTGGGATCATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTTCTGCCCAAGCATCAGAAGTGTCAAACCTGAGAGATTCAGTTGATCCTCATGCGGAAGTAAACTTTAATAATGCTACAAAAGTTGATGTTAAGATTGACACTAGTTCCAAGAATAAAGAGCCTAGGACGACTAAGAAGGTGCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAACTGCAATCATTCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAACAATCACATTTATTTTGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGTTGTTATTTGACGCAATTCAGAATGTGACTGGTTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAACTATTCCTTCTTGA 1887 40.81 MITLSDELMLFEIMMNCDNISRVQVNEWEKEICEQNSYSTHPVSIISFQHKSFWIPRDAGCLTDGEMNYDSSSRIENKRGHQWFMDGSAPELFSSKKQAIETVNTRTVPGVPHMNVSPWENTSSFQSVPGPFTDRLFGSEPIRTVNVVDRSITVGNANMDMGRKEFENHFANNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDADIGMSASLGHAYSSRGDGTVSMGTAFKKIHENAISLGQSYNSRDENSISVGPAYHKTDDSFISMGHAFSKGDGNFITNGHNYSKGDNSILSMSQPFDKGDYSFISMGQSYEKAEGNIISFGASYNKGHENFISMGPAYSKAGDTFISMASPYNKGNDDISMGPTYDKVNSDIVHVGPKYDKADSGAVSMAHNYHKGESNTISFGGFDDENAADNPSGGIISSYDLLMANQASAQASEVSNLRDSVDPHAEVNFNNATKVDVKIDTSSKNKEPRTTKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVTIPS 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1091374 1099021 - Cp4.1LG01g04780.1 Cpe01g00193 461506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00193 628 PANTHER AUTOIMMUNE REGULATOR 48 628 - -
Cpe01g00193 628 Pfam Tify domain binding domain 521 576 IPR032308 -
Cpe01g00193 628 PANTHER N-LYSINE METHYLTRANSFERASE 48 628 - -
Cpe01g00193 628 MobiDBLite consensus disorder prediction 470 491 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00193 Cpe01g01104 CCT
Cpe01g00193 Cpe01g01104 ECH
Cpe01g01104 Cpe01g00193 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00193 Cpe-Chr1:1091374 Cpe09g00545 Cpe-Chr9:3661149 2.29E-17 dispersed
Cpe01g00193 Cpe-Chr1:1091374 Cpe01g01104 Cpe-Chr1:6521592 0 wgd
Cpe01g00193 Cpe-Chr1:1091374 Cpe16g00590 Cpe-Chr16:6625512 2.96E-42 wgd
Cpe01g00193 Cpe-Chr1:1091374 Cpe03g00132 Cpe-Chr3:661351 4.17E-43 wgd
Cpe01g00193 Cpe-Chr1:1091374 Cpe05g00901 Cpe-Chr5:5948305 2.74E-07 wgd
Cpe01g00193 Cpe-Chr1:1091374 Cpe08g01153 Cpe-Chr8:8575977 2.68E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00193 - - cmax:111472013 1188.71