Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00201 ATGGTGGGCTCTGAGGAGGACTCTGCTACTGCTGGGGACGCGGTGCAGCTTTCTGGTGGAAATCGGAAATTGTTCTGGCGCTCGGCTTCTTGGTCTGCGTCACGGTCCTCCCTTCACCATCCTGATGTGAACAAAGATGGTGGAGACCCCAGTGGGCATCTTGGAGATAGTAATGGAACAAGCCGAATTTTTCATTCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTCTACAGCCTTTGTCGATAGCCCGGCGAAGCTTGGATGAGTGGCCCAAAGCGGGGTCGGACGACATAGGGGAGTGGCTGCAACCTCCTACACCAAGTGGGAGAGGAAATGGGGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAACCCGGATAAGAATTGTGGGCTTGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGCTCGAAAGTGGCGGATCATGTATATCTTGGTGGAGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATTACTCATGTGTTGAATTGTGTAGGCTTCGTTTGCCCGGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATCACTAGCATTCTCTATGATGTTTTTGACTACTTTGAAGATGTTAGAGAACAAAGTGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCCCGGTCAACGTCGTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTAAAGGCTGCAAGAGGTATTGCTGACCCGAATATGGGTTTCGCTTGCCAATTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCATTGTTGAGGATGTATAGAGTTGCCCCACACTCACCATATGATCCTTTGCATCTTGTCCCCAAAATGTTGAATGATCCTTCACCATCTGCACTTGATTCTAGAGGTGCTTTTATCATTCATATACCATCTGCCATATTTGTTTGGATTGGTAAGAACTGTAAAGCAATCATGGAAAGGGATGCAAGGGGGGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAATAAACTTTTGGGATTCCTTTGCAAACCTGTTACCTCTAATGGATAAATCCAACAGTAAAATCAATCCTGGGGAGTTAAAAGGTAAACCTTATCCAGGCGAGAGGAAAGTCGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATAACTGGTGGTTTTGTTCCTCCATTTCCTTCATCTGAGAATGAGCACGAAACCCATCTTCCTGTTAGAGAAAGCAATTGGAGTATGCTTAGGCGTAAGTTTGCCTCAGGGAACATGAAAGATTTCGTATCAGCTCCTCGAGTATCTCTGTCTAGGGTCTATTCAGACTCGTCGATGATGGTGCATTTTTCTGCAAAATCCTCATCGCCTTCAACGTTTTCTTTGTCTTCATCATCTTCTTCACCTATCTATCTTTCTCCAGATTCCCTCTCTTCTGATTCAGGTTCAAGTTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAGTCCTCTTTAGATTCTCCATCTGCATCTTCACCTTCAGTTCCAGCTTCTTCATCTCTGTCTAGTTTTTCTAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATCTGTGCCCAATGGTCCCGAAACTCGTGATGCAGTCCTCTTGGAATCAAGTTCTCACTCACTCTCATTCTCATCTAAAAAGTTCTCACCTTCTCTTGCAGAACGCCGAGGTAGTTCAAAGTCTCTGACATTGCCTACAATGCCCAGTAAAATCAGAGCAACAAATAGTGCCTCAAGATTTCTTGCCACTCAAGAAGATAGTAAGAGGAAAAACAAGAATTCTTTCTCTCTTAATGTATTAATTAATATGAAAAATGACTCAGAGCCTACAGATAGGGTTCCAAATGAACAGACAAGTTCCACTCAGAATTTCAAGAATTTTGAAAATGGAATCGATGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGATGCACAATCTACTAGTTCATGGAAAAGCTATCCCAAACCTTTTGAAAAAGGCATGCTATCCACCACTGTGTCTGGGAAGCAAGATGGTGAGTTTGTCCAACCTATGGTATACTGTTGGCCGGAATTAGAAAGGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTTTAGCCATCTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTTTATGTGGGTAGGAAGTTCTTTTGACCATGATTTATCTCAGGTTCGAGTAGAGAGGGATAACGACTTGGTTGATTTAGAGAAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACTGAAGTAGGTCTGCCAGAAAATGCAGAAATTAAGATCGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTGTTGTAG 2571 42.9 MVGSEEDSATAGDAVQLSGGNRKLFWRSASWSASRSSLHHPDVNKDGGDPSGHLGDSNGTSRIFHSPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWLQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCKAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPINFWDSFANLLPLMDKSNSKINPGELKGKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESNWSMLRRKFASGNMKDFVSAPRVSLSRVYSDSSMMVHFSAKSSSPSTFSLSSSSSSPIYLSPDSLSSDSGSSSSSSSSSKYFSESSLDSPSASSPSVPASSSLSSFSNMSLISSNSSLESVPNGPETRDAVLLESSSHSLSFSSKKFSPSLAERRGSSKSLTLPTMPSKIRATNSASRFLATQEDSKRKNKNSFSLNVLINMKNDSEPTDRVPNEQTSSTQNFKNFENGIDVRVGSVASCQQETKVDAQSTSSWKSYPKPFEKGMLSTTVSGKQDGEFVQPMVYCWPELERIAAFDTSYLNSKAALAIFSPSRYLGKKDDMMLFMWVGSSFDHDLSQVRVERDNDLVDLEKIDWVKVGQYVLTEVGLPENAEIKIVKEGEETEEFLARLSLL 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1131124 1136200 - Cp4.1LG01g04530.1 Cpe01g00201 461514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00201 856 MobiDBLite consensus disorder prediction 54 69 - -
Cpe01g00201 856 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 850 - -
Cpe01g00201 856 PANTHER MKPA PROTEIN 1 850 - -
Cpe01g00201 856 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 294 IPR029021 -
Cpe01g00201 856 MobiDBLite consensus disorder prediction 32 69 - -
Cpe01g00201 856 SMART VILL_6 302 399 IPR007122 GO:0051015
Cpe01g00201 856 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311|GO:0016791
Cpe01g00201 856 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470|GO:0008138
Cpe01g00201 856 Gene3D Protein tyrosine phosphatase superfamily 140 295 IPR029021 -
Cpe01g00201 856 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311|GO:0016791
Cpe01g00201 856 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0008138|GO:0016311
Cpe01g00201 856 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Cpe01g00201 856 MobiDBLite consensus disorder prediction 102 121 - -
Cpe01g00201 856 Gene3D Severin 304 399 IPR029006 -
Cpe01g00201 856 SMART dsp_5 153 292 IPR020422 GO:0006470|GO:0008138
Cpe01g00201 856 CDD DSP 154 288 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00201 Cpe01g01110 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00201 Cpe-Chr1:1131124 Cpe01g01575 Cpe-Chr1:9430635 0 dispersed
Cpe01g00201 Cpe-Chr1:1131124 Cpe01g01110 Cpe-Chr1:6560631 5.91E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00201 - - csv:101223210 1400.19