Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00201 | ATGGTGGGCTCTGAGGAGGACTCTGCTACTGCTGGGGACGCGGTGCAGCTTTCTGGTGGAAATCGGAAATTGTTCTGGCGCTCGGCTTCTTGGTCTGCGTCACGGTCCTCCCTTCACCATCCTGATGTGAACAAAGATGGTGGAGACCCCAGTGGGCATCTTGGAGATAGTAATGGAACAAGCCGAATTTTTCATTCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTCTACAGCCTTTGTCGATAGCCCGGCGAAGCTTGGATGAGTGGCCCAAAGCGGGGTCGGACGACATAGGGGAGTGGCTGCAACCTCCTACACCAAGTGGGAGAGGAAATGGGGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAACCCGGATAAGAATTGTGGGCTTGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGCTCGAAAGTGGCGGATCATGTATATCTTGGTGGAGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATTACTCATGTGTTGAATTGTGTAGGCTTCGTTTGCCCGGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATCACTAGCATTCTCTATGATGTTTTTGACTACTTTGAAGATGTTAGAGAACAAAGTGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCCCGGTCAACGTCGTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTAAAGGCTGCAAGAGGTATTGCTGACCCGAATATGGGTTTCGCTTGCCAATTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCATTGTTGAGGATGTATAGAGTTGCCCCACACTCACCATATGATCCTTTGCATCTTGTCCCCAAAATGTTGAATGATCCTTCACCATCTGCACTTGATTCTAGAGGTGCTTTTATCATTCATATACCATCTGCCATATTTGTTTGGATTGGTAAGAACTGTAAAGCAATCATGGAAAGGGATGCAAGGGGGGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAATAAACTTTTGGGATTCCTTTGCAAACCTGTTACCTCTAATGGATAAATCCAACAGTAAAATCAATCCTGGGGAGTTAAAAGGTAAACCTTATCCAGGCGAGAGGAAAGTCGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATAACTGGTGGTTTTGTTCCTCCATTTCCTTCATCTGAGAATGAGCACGAAACCCATCTTCCTGTTAGAGAAAGCAATTGGAGTATGCTTAGGCGTAAGTTTGCCTCAGGGAACATGAAAGATTTCGTATCAGCTCCTCGAGTATCTCTGTCTAGGGTCTATTCAGACTCGTCGATGATGGTGCATTTTTCTGCAAAATCCTCATCGCCTTCAACGTTTTCTTTGTCTTCATCATCTTCTTCACCTATCTATCTTTCTCCAGATTCCCTCTCTTCTGATTCAGGTTCAAGTTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAGTCCTCTTTAGATTCTCCATCTGCATCTTCACCTTCAGTTCCAGCTTCTTCATCTCTGTCTAGTTTTTCTAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATCTGTGCCCAATGGTCCCGAAACTCGTGATGCAGTCCTCTTGGAATCAAGTTCTCACTCACTCTCATTCTCATCTAAAAAGTTCTCACCTTCTCTTGCAGAACGCCGAGGTAGTTCAAAGTCTCTGACATTGCCTACAATGCCCAGTAAAATCAGAGCAACAAATAGTGCCTCAAGATTTCTTGCCACTCAAGAAGATAGTAAGAGGAAAAACAAGAATTCTTTCTCTCTTAATGTATTAATTAATATGAAAAATGACTCAGAGCCTACAGATAGGGTTCCAAATGAACAGACAAGTTCCACTCAGAATTTCAAGAATTTTGAAAATGGAATCGATGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGATGCACAATCTACTAGTTCATGGAAAAGCTATCCCAAACCTTTTGAAAAAGGCATGCTATCCACCACTGTGTCTGGGAAGCAAGATGGTGAGTTTGTCCAACCTATGGTATACTGTTGGCCGGAATTAGAAAGGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTTTAGCCATCTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTTTATGTGGGTAGGAAGTTCTTTTGACCATGATTTATCTCAGGTTCGAGTAGAGAGGGATAACGACTTGGTTGATTTAGAGAAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACTGAAGTAGGTCTGCCAGAAAATGCAGAAATTAAGATCGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTGTTGTAG | 2571 | 42.9 | MVGSEEDSATAGDAVQLSGGNRKLFWRSASWSASRSSLHHPDVNKDGGDPSGHLGDSNGTSRIFHSPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWLQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCKAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPINFWDSFANLLPLMDKSNSKINPGELKGKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESNWSMLRRKFASGNMKDFVSAPRVSLSRVYSDSSMMVHFSAKSSSPSTFSLSSSSSSPIYLSPDSLSSDSGSSSSSSSSSKYFSESSLDSPSASSPSVPASSSLSSFSNMSLISSNSSLESVPNGPETRDAVLLESSSHSLSFSSKKFSPSLAERRGSSKSLTLPTMPSKIRATNSASRFLATQEDSKRKNKNSFSLNVLINMKNDSEPTDRVPNEQTSSTQNFKNFENGIDVRVGSVASCQQETKVDAQSTSSWKSYPKPFEKGMLSTTVSGKQDGEFVQPMVYCWPELERIAAFDTSYLNSKAALAIFSPSRYLGKKDDMMLFMWVGSSFDHDLSQVRVERDNDLVDLEKIDWVKVGQYVLTEVGLPENAEIKIVKEGEETEEFLARLSLL | 856 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1131124 | 1136200 | - | Cp4.1LG01g04530.1 | Cpe01g00201 | 461514 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00201 | 856 | MobiDBLite | consensus disorder prediction | 54 | 69 | - | - | |
Cpe01g00201 | 856 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE MKP1 | 1 | 850 | - | - | |
Cpe01g00201 | 856 | PANTHER | MKPA PROTEIN | 1 | 850 | - | - | |
Cpe01g00201 | 856 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 148 | 294 | IPR029021 | - | |
Cpe01g00201 | 856 | MobiDBLite | consensus disorder prediction | 32 | 69 | - | - | |
Cpe01g00201 | 856 | SMART | VILL_6 | 302 | 399 | IPR007122 | GO:0051015 | |
Cpe01g00201 | 856 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 237 | 247 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe01g00201 | 856 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 153 | 295 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe01g00201 | 856 | Gene3D | Protein tyrosine phosphatase superfamily | 140 | 295 | IPR029021 | - | |
Cpe01g00201 | 856 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 212 | 273 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe01g00201 | 856 | Pfam | Dual specificity phosphatase, catalytic domain | 161 | 291 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe01g00201 | 856 | SUPERFAMILY | Actin depolymerizing proteins | 300 | 401 | - | - | |
Cpe01g00201 | 856 | MobiDBLite | consensus disorder prediction | 102 | 121 | - | - | |
Cpe01g00201 | 856 | Gene3D | Severin | 304 | 399 | IPR029006 | - | |
Cpe01g00201 | 856 | SMART | dsp_5 | 153 | 292 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe01g00201 | 856 | CDD | DSP | 154 | 288 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00201 | Cpe01g01110 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00201 | Cpe-Chr1:1131124 | Cpe01g01575 | Cpe-Chr1:9430635 | 0 | dispersed | |
Cpe01g00201 | Cpe-Chr1:1131124 | Cpe01g01110 | Cpe-Chr1:6560631 | 5.91E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00201 | - | - | csv:101223210 | 1400.19 |