Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00205 ATGTGCCCTTTCAGCCATCGGGTTCTGTTAACTTTGGAGGAGAAGAAACTTTGCTACGAATTGCATCTCATTAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCCGGAGGGAAGGTGCCGGTGGTGAAGTTTGATGGCAAATGGGTATCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTACCCTGAGCCTTCGCTTGTTACTCCTCCTGAAATTTCTTCTAGCAAGGATGCAAACGATGGTTCAGAGCAGGCTCTCCTCGAAGAGTTGAAGGCATTGGACGAGCATCTCAAGGCACATGGTCCCTATGTTGCTGGAGACAAGGTAACTGCTGTCGACTTGAGTCTTGCACCAAAGTTATACCATCTTGACGTTGCTCTTAGCCATTTCAAGAATTGGTCTATCCCCAAAGAGTTAGCCAGCTTAATCGCCTACAAAGAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCCGAGCCGAAATATGTGATTGCTGGATGGGAGCGCAAGAGGGTTCTCTTAACTTTAGAGGAGAAGAAAGTTCCTTACAAACTGCATCTCATCAATTTATCCGATAAACCCATTTGGTTTTTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTACCCTGAGCCGTCTCTTACAAAGGCTGCCCCAGAACACGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTACTGCAGAACCTGTAATTTCTGATAGTGAGCCCAAGGTGAATGCTGCTGCAGAACCTGTAATTTCTGATAGTGAGCCCAAGGTGAATGCTGCCGCAGAACATGTAGTTTCTGATAGTGAGCCCAAGGCCATTGAGGTTGCTGTCAAGGCTGCTGTTGGTGCACTCGATGTTATTGGAGACTGCCCTTTCGCTCAAAGGGTTCTTTTGACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCGATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCGGTGGCCAAGATTGACGACAAATGGGTTCCCGACTCCGATGTCATTGTCGGGATTCTTGAGGAGAAGTATCCCGAGCCTTTTCTTGCGACTCCACCTGAATTTTCTACTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAGAGTAAGGACCCGAATGATGGTTCGGAGCAGGCTTTGCTTGAAGAATTGAAGGCATTGAACGAGCATCTCAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTTACCGCTGTTGATTTGAGTCTGGCACCAAAGTTATACCATCTTGATGTTGCACTTGGCCATTTCAAGAAGTGGATTTTCCCTGAAAACTTGACCATTGCTTTTCGCTCGAGAATCGTTTGTGAAGACGAAGGCTGCCCCGGAACATGTAATTTCTGGTTGGGAGGCCAAAGTCCTTTCACTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACATATTGCATCTCATCAATTTATCCGATAAACCCTGTTGGTTCTTGGGAGCTAGCCCAGAAGGGAAGGTGCCGGTGGCGAAGATTGATCGTCAATGGGTTCCTGATTCTGATGTCATTGTGAGGATTCTTGAGGACAAGAGCAAGGACCCGAATGATTGTTCAGAGCAGGCTTTGCTTAGAGAGCTGAAGGCATTGGACAAGCATCTCATGGCTTATGGTCCTTATGTCGCCGGAGCGAAGGTAAGTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATCTTGATATTGCTCTTGCCCATTTCAAGAACTTTCATGTCCCCCAAAACTTAGCCTGTTTATCTGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGCCCCGGAACATGTAATTATGGGTTGGGAGGCCAAGGTGAATGCTGCATGA 2010 46.67 MCPFSHRVLLTLEEKKLCYELHLINLSDKPSWFLEVSPGGKVPVVKFDGKWVSDSDVIVGILEEKYPEPSLVTPPEISSSKDANDGSEQALLEELKALDEHLKAHGPYVAGDKVTAVDLSLAPKLYHLDVALSHFKNWSIPKELASLIAYKELLFARESFVKTKAEPKYVIAGWERKRVLLTLEEKKVPYKLHLINLSDKPIWFLEVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLTKAAPEHVISGWEPKVNATAEPVISDSEPKVNAAAEPVISDSEPKVNAAAEHVVSDSEPKAIEVAVKAAVGALDVIGDCPFAQRVLLTLEEKKVPYKWHLIDLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEEKYPEPFLATPPEFSTVGSKINGAFVKFLKSKDPNDGSEQALLEELKALNEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDVALGHFKKWIFPENLTIAFRSRIVCEDEGCPGTCNFWLGGQSPFTQRVLLTLEEKKVPYILHLINLSDKPCWFLGASPEGKVPVAKIDRQWVPDSDVIVRILEDKSKDPNDCSEQALLRELKALDKHLMAYGPYVAGAKVSAVDLSLAPKLYHLDIALAHFKNFHVPQNLACLSAYKKLLFARESFVKTKAAPEHVIMGWEAKVNAA 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1155976 1164961 - Cp4.1LG01g04640.1 Cpe01g00205 461518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00205 669 Gene3D Glutaredoxin 300 388 - -
Cpe01g00205 669 Pfam Glutathione S-transferase, N-terminal domain 504 566 IPR004045 -
Cpe01g00205 669 Gene3D Glutaredoxin 177 242 - -
Cpe01g00205 669 CDD GST_N_family 1 59 - -
Cpe01g00205 669 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 303 478 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cpe01g00205 669 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 177 249 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cpe01g00205 669 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 2 176 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cpe01g00205 669 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 502 664 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cpe01g00205 669 SUPERFAMILY Thioredoxin-like 177 242 IPR036249 -
Cpe01g00205 669 SFLD Glutathione Transferase (cytosolic) 320 466 IPR040079 -
Cpe01g00205 669 Gene3D Glutaredoxin 488 562 - -
Cpe01g00205 669 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 70 IPR004045 -
Cpe01g00205 669 SUPERFAMILY GST C-terminal domain-like 402 476 IPR036282 -
Cpe01g00205 669 Gene3D Glutaredoxin 1 70 - -
Cpe01g00205 669 CDD GST_N_family 321 378 - -
Cpe01g00205 669 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 163 241 IPR004045 -
Cpe01g00205 669 CDD GST_N_family 178 230 - -
Cpe01g00205 669 Gene3D - 563 668 - -
Cpe01g00205 669 Gene3D - 391 482 - -
Cpe01g00205 669 Gene3D - 76 176 - -
Cpe01g00205 669 SUPERFAMILY GST C-terminal domain-like 564 665 IPR036282 -
Cpe01g00205 669 SUPERFAMILY Thioredoxin-like 502 570 IPR036249 -
Cpe01g00205 669 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 311 389 IPR004045 -
Cpe01g00205 669 Pfam Glutathione S-transferase, N-terminal domain 177 240 IPR004045 -
Cpe01g00205 669 Pfam Glutathione S-transferase, N-terminal domain 2 69 IPR004045 -
Cpe01g00205 669 Pfam Glutathione S-transferase, N-terminal domain 320 388 IPR004045 -
Cpe01g00205 669 SUPERFAMILY Thioredoxin-like 1 69 IPR036249 -
Cpe01g00205 669 SFLD Main (cytGST) 320 466 - -
Cpe01g00205 669 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 48 190 IPR010987 -
Cpe01g00205 669 CDD GST_N_family 504 565 - -
Cpe01g00205 669 SUPERFAMILY Thioredoxin-like 318 388 IPR036249 -
Cpe01g00205 669 Pfam Glutathione S-transferase, C-terminal domain 419 468 - -
Cpe01g00205 669 Pfam Glutathione S-transferase, C-terminal domain 83 143 - -
Cpe01g00205 669 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 494 572 IPR004045 -
Cpe01g00205 669 SUPERFAMILY GST C-terminal domain-like 78 176 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00205 Cpe-Chr1:1155976 Cpe08g01131 Cpe-Chr8:8484316 5.21E-07 dispersed
Cpe03g00710 Cpe-Chr3:4288149 Cpe01g00205 Cpe-Chr1:1155976 4.34E-24 transposed
Cpe01g00205 Cpe-Chr1:1155976 Cpe01g01113 Cpe-Chr1:6580517 2.02E-26 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00205 K21888 - cmax:111483829 457.603