Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g00222 | ATGGTATCTGAAACTTTGATGAAGATTGTATCACCCTGCTGGAAACCTTCAGTTGAAGGCGGAAATTCTAGTAGAGGTGGGGATGCAAGTGGTCGGGTTGACGGGCTGTTGTGGTACAAGGATTCTGGCCGCCATATTAATGGAGAATTCTCAATGGCAGTTATTCAGGCAAATAAATTGTTGGAAGACCGCAGCCAGCTTGAGTCAGGGCCACTGAGCTCATTTGAATCGGGTCCTGTTGGAACGTTTGTTGGAATCTATGATGGCCATGGAGGTCCCGAAGCTGCAGAATTCATAAATGATCGTCTGTTCAATAATATGAAGACTTTTCATGGTGCAGAATTTATTCCAGATAATCAGGGAGTATCGGCTGAAATTATTAACAAAGCGTTCGTGGAGACAGAGGAAGAGTTCTTGTCTCTTGTAAAGAAACAATGGCTTATTAAGCCGCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTACTGTATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGAAGAACTGAAAAAACTCATAAAGAGGTTAAAGCTGTCCAATTGTCGTCTGAGCACAATGCAAGTATTGAATCTGTGAGAGAGGAGTTGCACTTGTTGCATCCCAATGATCCACACATTGTGGTCTTAAAGCACAAGGTGTGGCGTGTGAAGGGTGTTATACAGGTTTGTTCTTCAACCCCCCTTGTCTTCTTTGATATTTCCTGA | 750 | 42.93 | MVSETLMKIVSPCWKPSVEGGNSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANKLLEDRSQLESGPLSSFESGPVGTFVGIYDGHGGPEAAEFINDRLFNNMKTFHGAEFIPDNQGVSAEIINKAFVETEEEFLSLVKKQWLIKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRTEKTHKEVKAVQLSSEHNASIESVREELHLLHPNDPHIVVLKHKVWRVKGVIQVCSSTPLVFFDIS | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1248672 | 1251720 | + | Cp4.1LG01g04510.1 | Cpe01g00222 | 461535 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g00222 | 249 | ProSiteProfiles | PPM-type phosphatase domain profile. | 49 | 249 | IPR001932 | - | |
Cpe01g00222 | 249 | PANTHER | ALPHABET, ISOFORM E-RELATED | 8 | 240 | - | - | |
Cpe01g00222 | 249 | PANTHER | PROTEIN PHOSPHATASE 2C 38-RELATED | 8 | 240 | - | - | |
Cpe01g00222 | 249 | CDD | PP2Cc | 50 | 237 | IPR001932 | - | |
Cpe01g00222 | 249 | Pfam | Protein phosphatase 2C | 81 | 205 | IPR001932 | - | |
Cpe01g00222 | 249 | SUPERFAMILY | PP2C-like | 58 | 238 | IPR036457 | - | |
Cpe01g00222 | 249 | Gene3D | - | 39 | 241 | IPR036457 | - | |
Cpe01g00222 | 249 | SMART | PP2C_4 | 41 | 248 | IPR001932 | - | |
Cpe01g00222 | 249 | ProSitePatterns | PPM-type phosphatase domain signature. | 83 | 91 | IPR000222 | GO:0043169 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g00222 | Cpe01g01128 | CCT | |
Cpe01g00222 | Cpe01g01128 | ECH | |
Cpe01g01128 | Cpe01g00222 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00222 | Cpe-Chr1:1248672 | Cpe10g00688 | Cpe-Chr10:3957063 | 5.52E-106 | dispersed | |
Cpe01g00222 | Cpe-Chr1:1248672 | Cpe01g01128 | Cpe-Chr1:6676303 | 2.88E-167 | wgd | |
Cpe01g00222 | Cpe-Chr1:1248672 | Cpe03g00147 | Cpe-Chr3:742758 | 1.87E-106 | wgd | |
Cpe01g00222 | Cpe-Chr1:1248672 | Cpe08g01134 | Cpe-Chr8:8492012 | 5.14E-105 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g00222 | K01102 | - | csv:101220760 | 443.736 |