Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00222 ATGGTATCTGAAACTTTGATGAAGATTGTATCACCCTGCTGGAAACCTTCAGTTGAAGGCGGAAATTCTAGTAGAGGTGGGGATGCAAGTGGTCGGGTTGACGGGCTGTTGTGGTACAAGGATTCTGGCCGCCATATTAATGGAGAATTCTCAATGGCAGTTATTCAGGCAAATAAATTGTTGGAAGACCGCAGCCAGCTTGAGTCAGGGCCACTGAGCTCATTTGAATCGGGTCCTGTTGGAACGTTTGTTGGAATCTATGATGGCCATGGAGGTCCCGAAGCTGCAGAATTCATAAATGATCGTCTGTTCAATAATATGAAGACTTTTCATGGTGCAGAATTTATTCCAGATAATCAGGGAGTATCGGCTGAAATTATTAACAAAGCGTTCGTGGAGACAGAGGAAGAGTTCTTGTCTCTTGTAAAGAAACAATGGCTTATTAAGCCGCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTACTGTATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGAAGAACTGAAAAAACTCATAAAGAGGTTAAAGCTGTCCAATTGTCGTCTGAGCACAATGCAAGTATTGAATCTGTGAGAGAGGAGTTGCACTTGTTGCATCCCAATGATCCACACATTGTGGTCTTAAAGCACAAGGTGTGGCGTGTGAAGGGTGTTATACAGGTTTGTTCTTCAACCCCCCTTGTCTTCTTTGATATTTCCTGA 750 42.93 MVSETLMKIVSPCWKPSVEGGNSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANKLLEDRSQLESGPLSSFESGPVGTFVGIYDGHGGPEAAEFINDRLFNNMKTFHGAEFIPDNQGVSAEIINKAFVETEEEFLSLVKKQWLIKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRTEKTHKEVKAVQLSSEHNASIESVREELHLLHPNDPHIVVLKHKVWRVKGVIQVCSSTPLVFFDIS 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1248672 1251720 + Cp4.1LG01g04510.1 Cpe01g00222 461535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00222 249 ProSiteProfiles PPM-type phosphatase domain profile. 49 249 IPR001932 -
Cpe01g00222 249 PANTHER ALPHABET, ISOFORM E-RELATED 8 240 - -
Cpe01g00222 249 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 240 - -
Cpe01g00222 249 CDD PP2Cc 50 237 IPR001932 -
Cpe01g00222 249 Pfam Protein phosphatase 2C 81 205 IPR001932 -
Cpe01g00222 249 SUPERFAMILY PP2C-like 58 238 IPR036457 -
Cpe01g00222 249 Gene3D - 39 241 IPR036457 -
Cpe01g00222 249 SMART PP2C_4 41 248 IPR001932 -
Cpe01g00222 249 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00222 Cpe01g01128 CCT
Cpe01g00222 Cpe01g01128 ECH
Cpe01g01128 Cpe01g00222 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00222 Cpe-Chr1:1248672 Cpe10g00688 Cpe-Chr10:3957063 5.52E-106 dispersed
Cpe01g00222 Cpe-Chr1:1248672 Cpe01g01128 Cpe-Chr1:6676303 2.88E-167 wgd
Cpe01g00222 Cpe-Chr1:1248672 Cpe03g00147 Cpe-Chr3:742758 1.87E-106 wgd
Cpe01g00222 Cpe-Chr1:1248672 Cpe08g01134 Cpe-Chr8:8492012 5.14E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00222 K01102 - csv:101220760 443.736