Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00248 ATGGATCTGGAAAGTGGGGTTCGTAGTGAAAAGAATGCCAAGAAAGAGTCATGGAAGGCGGTTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTCTATGGCGAGTTGGGTACTTCGCCTCTGTATGTCTATAAGAACACTTTTGCAGAAGAAGATATCGGTCATTCGAAGAGCAACGATGAGATTTATGGCGTTTTGTCCTTTGTTTTTTGGACGCTCACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCCGATGATAATGGCGAGGGAGGGACATTTGCTCTGTATTCGTTACTATGTCGACATGCCAGAGTTAACGCATTACCCAATACCCAGTTGGCTGATTCTGAACTCACTGATTTCAAGATGGATGTTCTTGGTCCGCAATCTCAAGAAAGTTTTGGATTCAAACTCAAATCTGCCTTAGAAAAGCGTCAGGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGGCTTGCATGGTGATAGGAGATGGCATCTTAACACCAGCTATTTCTGTTCTTTCTGCGGTTTCTGGGCTCGAGCATACCATGAAGATAGAGCATCACCAATATATAATAATCCCGATTTCATGCACCGTACTGATAGGCTTGTTTGCTCTTCAACACTACGGCACGCACAGGATTGGCTTCTTGTTTGCTCCAATAGTGACAGTGTGGCTATTCTGTATCAGTGCCATTGGCTTGTACAATATTATTCACTGGAATCCCAGTGTTTATAGAGCAATTTCTCCTACTTACATGTTTCGATTTCTTAAGAAAACACAAAAGGGAGGCTGGATGTCACTTGGTGGAATTATGCTGTGCATTACTGGTTCGGAGGCAATGTTCGCTGACCTTGGCCATTTTTCACAGTTGTCAATTAAGATTGCTTTCTCTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTTTCTCAAAATTATACCTCTCCATCCGACCATCGAATCGGGTTTTATGTATCTGTACCTGAGAAATTGAGGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCTGTAGTAGGAAGTCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTCAAAATCGTCCATACGTCCTCTAAAGTTCACGGTCAAATCTATATCCCGGAGATTAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCATAAGCTTCAGAGACACAAAGCGCTTGGGTCATGCCTCAGGTTTGGCAGTGATCACTGTCATGCTCGTTACTACGTGCTTAATGTCTCTTGTTATTGTCCTGTGTTGGCATCGAAGTGTATTTCTTGCCATAGGCTTCATCTTCTTCTTTGGGACCATTGAATCTCTGTACTTCTCAGCTTCTCTGATCAAATTTCTTGAAGGAGCGTGGGTTCCCATTGCAATTTCTCTTGTATTAATGATTGTTATGTATGTCTGGCACTATGGTACTCTAAAGAAGTTTGAATCTGACATTCAAAACAAGGTTTCTATTAACTGGCTACTTGGTTTGGGCCCGAGCCTCGGCATTGTAAGAGTCCGTGGGATCGGTGTCATTCAGACAGAGCTTGTGTCGGGAATCCCGGGTATCTTCACCCACTTCGTCACCAACATTCCTGCCTTCCATCAAGTACTTGTTTTCCTTTGCATCAAATATGTCCCAGTGCCACATGTTAGAGCAGAGGAACGGTTCCTAATTGGTCGTATTGGTACGAGTGAATATAGACTGTATAGGTGCATTGTGCGATATGGGTATCGAGACGTTCATAAAGACGACGTAGAGTTTGAGAATGATCTTATATGCAGCATAGCAGAGTTCATAAGATCAGGGAGTGCAGAATGTAGTGATTCAAGACAGTGCTTTGATAACCATAGTGAAAAGATGACAGTCGTCGGGACATCGTCTACCTCCGAAGATAGAGTTCAGATGGCCAAGACAATCATGGATGAAAGCTCTGAAGATCTGTACAGAGCTTCAGACACAAGGGAAATAAGATCACCAGCTCCAGTTCAGTTGAGAAAACGAGTGCGCTTCATTGTACCAGAGAGCCCGAAAATCGACACGGATACAAGGGAAGAACTACAAGAACTAATGGAAGCAAGAGAAGTAGGAGTGGCTTACATATTAGGACGGTCACACATGAAAGCGAAACAAGGATCGAGCACAGTGAAAAGAGTAATGATCGATTTCATTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTGACTACCCTGTAGGTTTATCACACTCTTCATCAGCCCTTGAAGTGGGTATGATGTATTTGGTTTAG 2352 43.15 MDLESGVRSEKNAKKESWKAVLMMAYQSLGVVYGELGTSPLYVYKNTFAEEDIGHSKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVNALPNTQLADSELTDFKMDVLGPQSQESFGFKLKSALEKRQVLQKFLLVLALIGACMVIGDGILTPAISVLSAVSGLEHTMKIEHHQYIIIPISCTVLIGLFALQHYGTHRIGFLFAPIVTVWLFCISAIGLYNIIHWNPSVYRAISPTYMFRFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFSFMVYPSLLLAYMGQAAYLSQNYTSPSDHRIGFYVSVPEKLRWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKVHGQIYIPEINWILMLLCLAVTISFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVLMIVMYVWHYGTLKKFESDIQNKVSINWLLGLGPSLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRAEERFLIGRIGTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGSAECSDSRQCFDNHSEKMTVVGTSSTSEDRVQMAKTIMDESSEDLYRASDTREIRSPAPVQLRKRVRFIVPESPKIDTDTREELQELMEAREVGVAYILGRSHMKAKQGSSTVKRVMIDFIYEFLRKNSREADYPVGLSHSSSALEVGMMYLV 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1418385 1424113 + Cp4.1LG01g04130.1 Cpe01g00248 461561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00248 783 Pfam K+ potassium transporter 26 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00248 783 PANTHER POTASSIUM TRANSPORTER 6 1 782 - -
Cpe01g00248 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00248 783 TIGRFAM kup: potassium uptake protein 24 781 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00248 Cpe-Chr1:1418385 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe01g00248 Cpe-Chr1:1418385 Cpe01g01519 Cpe-Chr1:9094534 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00248 K03549 - csv:101212925 1381.7