Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00249 ATGGCATCAAGATCCCCCACAAATTTTTTGGACCTGGCTTCTGGAGATTTACTTGATCTTCCTCGTACACCTAGACCCCTACCACGGGTAATGACTGTTCCTGGAATTATTTCGGAAATGGATGACTATGGGAGCAATGACGGAGATTCGGAGTCTTCATCTGTATGCCGTGAGCGCAAAATCATAGTTGCAAATATGTTGCCCTTGCAAGCTAAAAAAGACGGGCAATCTGGCAAATGGTGCTTCAGTTTTGACGAGGATTCAATTTTATTGCAGTTAAAGAATGGGTTTTCACCTGAGATGGAGGTTATATACGTGGGTTCCCTCAAGGTTGAAATCGACGCCAACGAACAGGAAGAGGTTGCTCAGAAGCTTTTTGACAATTTTAATTGTGTACCTACATTTCTACCACATGATCTACAGAAGAAATTTTATCTTGGGTTCTGCAAACAACAGATATGGCCCTTATTCCATTACATGCTACCAATGTGCCCAGAGCACGGTGATCGCTTCGATCGGCTGCTTTGGCAAGCCTATGTTTCTGCAAATAAAATATTTGCTGACAAGGTGATGGAAATCATCAATCCTGAAGAAGATTCTGTTTGGGTTCATGATTACCATTTAATGGTTCTTCCAACATTTTTAAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTTCTGCATAGCCCGTTTCCGTCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGCCTGCTAAACTGTGATTTAGTTGGTTTTCATACGTTTGATTATGCTCGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCCTGGACTATGAATCTAAGCGGGGACATATTGGACTAGATTATTATGGCCGCACGGTATATATCAAAATTCTTCCTGTAGGCATTCACATGGGTCGGCTGGAATCGGTGATGAATCTTCCATCTACATCTGCTAAAGTCAGAGAAGTTCGAGATCAATTCATGGGGAAGAAATTAATTCTTGGTATTGATGACATGGACATTTTTAAGGGCATAAGCCTGAAGCTTCTCGCTGTTGAACAGCTTTTACGGCAACGTCCTGAGTTGCGAGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGATCAGGTAAAGATGTACATGAAGCTCAGAAGGAAACCTACTTGGCTGCTGAAAGGATCAATGAAACTTATGGTTCAAATAACTACAAACCTGTAATTCTGATTGATCGCCCTGTTCCACGTTTTGAGAAGACTGCTTATTATGCATTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGTATGAATTTGGTTCCATACAAGTATATTGTTTGTAGGCAAGGAACTCCTTTTATGGATAAGGCTATGGGCTTACAAGTTGGTTCTCCTCGGACGAGTATGCTTGTAGTGTCCGAGTTTATTGGTTGCTCGCCTTCTTTAAGTGGAGCTATCAGGGTTAACCCTTGGGACATTGATGCTGTCGCGGATGCCTTGGAATTGGCCATTACCATGCCGGAGTCAGAGAAGCAGTTGCGGCATGAGAAACATTATCGATATGTCAGTTCCCATGATATAGGATATTGGTCTCGAAGTTTTATGCTGGATTTAGAGAGAGCATGCCAAGATCACTATAGTAAACGGTGCTGGGGAATTGGCTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACAATTGATCACATTGTCTCAGCTTATAAGAGAACACATAGAAGGGCGATATTTTTGGATTACGATGGCACTATTATTCCGCAAAGCTCCATAATTAAGACACCGAGCCCAGAAGTTATCTCCGTCTTGACTACGCTTTGCAATGACCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTGAATGGTTTGCCTCTTGTGAGATGTTGGGGATTGCAGCAGAACATGGGTACTTTATAAGGTGGGGCGGAACTTCAGAATGGGAAACCAGTCCAGTGTCTTCTGATCTGGATTGGATTAAAATTGTAGAGCCAGTGATGAGATCATATACAGAAGCAACTGATGGGTCGTGCATAGAACCAAAAGAGAGTGCTTTAGTCTGGCATCATCAAGATGCCGATTCTGACTTCGGATCCTGTCAAGCTAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAACGAACCAGCCGTTGTTAAAAGGGGTCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCGAGAATGGTAGATAGTGGAAGACCACCTGATTTTGTGATGTGCATCGGAGATGATAGATCAGATGAAGATATGTTCGAGAGCATATCAAGCATTGTCTCTAGTCCTTCACTGCCTTCCGCTCCAGAAATTTTTGCCTGCACCGTTGGGCGAAAGCCAAGCAAGGCGAAGTTCTACCTTGATGATACTTCCGACGTCGTGAAATTGCTGCAAGGCCTTGCCTCTACTTCACGTCCAAGACCTCGGCAACTACCCCAAATGCGTGTTTCCTTTGAAAGTGTGTTTTGA 2583 43.55 MASRSPTNFLDLASGDLLDLPRTPRPLPRVMTVPGIISEMDDYGSNDGDSESSSVCRERKIIVANMLPLQAKKDGQSGKWCFSFDEDSILLQLKNGFSPEMEVIYVGSLKVEIDANEQEEVAQKLFDNFNCVPTFLPHDLQKKFYLGFCKQQIWPLFHYMLPMCPEHGDRFDRLLWQAYVSANKIFADKVMEIINPEEDSVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTSAKVREVRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQRPELRGKIVLVQIVNPARGSGKDVHEAQKETYLAAERINETYGSNNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPFMDKAMGLQVGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMPESEKQLRHEKHYRYVSSHDIGYWSRSFMLDLERACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIIPQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGEWFASCEMLGIAAEHGYFIRWGGTSEWETSPVSSDLDWIKIVEPVMRSYTEATDGSCIEPKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESISSIVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQGLASTSRPRPRQLPQMRVSFESVF 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1427573 1433032 + Cp4.1LG01g04120.1 Cpe01g00249 461562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00249 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
Cpe01g00249 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 847 IPR001830 GO:0003824|GO:0005992
Cpe01g00249 860 Gene3D - 590 714 IPR023214 -
Cpe01g00249 860 Gene3D - 720 849 IPR023214 -
Cpe01g00249 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Cpe01g00249 860 CDD HAD_TPP 592 833 - -
Cpe01g00249 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Cpe01g00249 860 Gene3D Glycogen Phosphorylase B; 52 311 - -
Cpe01g00249 860 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 847 - -
Cpe01g00249 860 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 797 IPR006379 -
Cpe01g00249 860 Gene3D Glycogen Phosphorylase B; 312 528 - -
Cpe01g00249 860 SUPERFAMILY HAD-like 591 839 IPR036412 -
Cpe01g00249 860 CDD GT20_TPS 59 544 IPR001830 GO:0003824|GO:0005992
Cpe01g00249 860 TIGRFAM T6PP: trehalose-phosphatase 589 838 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00249 Cpe-Chr1:1427573 Cpe01g01518 Cpe-Chr1:9083985 0 dispersed
Cpe01g00249 Cpe-Chr1:1427573 Cpe18g00836 Cpe-Chr18:7720004 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00249 K16055 - csv:101212688 1651.72