Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00261 ATGTCCGTATCGATTTCCAACTGCTTCTCTGATTTGCTCTGCCAGGAGGATTCCTCCGGCGTCTTGTCCGGCGAATCGCCGGGATGTTCTTCTGACCTCGATTCCCCGGCCTGCGTCGAGGAATCTATCGCCGTCTTCATCAAGGACGAGCGTCACTTCGTCCCCGATTACGACTGTTTGTCGCGCTTCCAATCTCCGTCGCTGGATGCGGCCGCTAGATTAGACTCTGTTGCATGGATTCTTAAGGTTCAAGCCTATTACGGTTTTCAGCCGTTGACAGCGTATCTCTCCGTCAACTACTTGGATCGATTCCTTTGTTCACGGCGTTTGCCGCAAACTAATGGGTGGCCTTTGCAACTACTCTCTGTTGCTTGCCTCTCACTGGCTGCTAAAATGGAGGAACCTCTTGTTCCTGCTTTACTGGATCTTCAGGTTGAGGGGGCCAAATATATATTTGAACCCAGAACAATATGCAGGATGGAATTACTGGTGCTGAGGGTATTGGATTGGCGGCTGCGTTCTGTAACGCCGTTCAATTTCATCGCATTCTTTGCTTGCAAGCTCGATCCATCTGGGGATTTCATGGGGTTTCTTATTTCAAGAGCCACAGAAATTATAATATCAAATATCCGAGAGGTAATCTTTCTGGAGTACTGGCCATCGTGTATAGCGGCGGCCGCCTTGCTTTGTGCAGCAAATGAAGTCCCGAATTTGTCTGTTGTGAATCCAGAGCATGCTGAATCATGGTGCAGTGGTCTAAGGAAAGAAAATATCATCGGCTGCTACCGGTTAATGCAAGAGATTGTGCTTGATAGTTGCCGGATCAAGTCCCCCAAAATCCTACCTCAGTTTAGAGTGACAGTCCGCACTAGAATGAGATCCAGCGACTTATCCCCCTACTCCTCCTCCTCTTCCTCATCTTCGTCATCACCAAACAAAAGGAGAAAATTAAACCAGAGCCTCTGGGTAGGTGATGACAAAGATAACCCCGAAGAATGA 999 48.45 MSVSISNCFSDLLCQEDSSGVLSGESPGCSSDLDSPACVEESIAVFIKDERHFVPDYDCLSRFQSPSLDAAARLDSVAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQTNGWPLQLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRMELLVLRVLDWRLRSVTPFNFIAFFACKLDPSGDFMGFLISRATEIIISNIREVIFLEYWPSCIAAAALLCAANEVPNLSVVNPEHAESWCSGLRKENIIGCYRLMQEIVLDSCRIKSPKILPQFRVTVRTRMRSSDLSPYSSSSSSSSSSPNKRRKLNQSLWVGDDKDNPEE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1491609 1495911 - Cp4.1LG01g04070.1 Cpe01g00261 461574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00261 332 Pfam Cyclin, N-terminal domain 43 172 IPR006671 -
Cpe01g00261 332 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 321 - -
Cpe01g00261 332 MobiDBLite consensus disorder prediction 294 332 - -
Cpe01g00261 332 CDD CYCLIN 73 165 IPR013763 -
Cpe01g00261 332 Gene3D - 56 173 - -
Cpe01g00261 332 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Cpe01g00261 332 Pfam Cyclin, C-terminal domain 175 272 IPR004367 -
Cpe01g00261 332 MobiDBLite consensus disorder prediction 294 317 - -
Cpe01g00261 332 Gene3D - 47 236 - -
Cpe01g00261 332 SUPERFAMILY Cyclin-like 34 172 IPR036915 -
Cpe01g00261 332 SMART Cyclin_C_2 175 311 IPR004367 -
Cpe01g00261 332 SMART cyclin_7 78 166 IPR013763 -
Cpe01g00261 332 SUPERFAMILY Cyclin-like 157 270 IPR036915 -
Cpe01g00261 332 PANTHER CYCLINS 1 321 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00261 Cpe-Chr1:1491609 Cpe11g00745 Cpe-Chr11:5841771 3.83E-158 dispersed
Cpe06g00199 Cpe-Chr6:1068850 Cpe01g00261 Cpe-Chr1:1491609 9.45E-38 dispersed
Cpe19g00668 Cpe-Chr19:5336508 Cpe01g00261 Cpe-Chr1:1491609 8.78E-34 dispersed
Cpe01g00261 Cpe-Chr1:1491609 Cpe01g01409 Cpe-Chr1:8468168 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00261 K18810 - csv:101209417 575.474