Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00268 ATGGCTATGCTGCTTCACCTTCACCTTCGCCGTCAGCTATGGCCTCTTCATCTCCTTCTTCTCTTCCTCTCTGTTTCCCCTGTTTCTTATTGCCAAGACACTCCACCTCAAAATATCGAAACTTTCTATCCAATTCTTCCTCCACCACCGTTCTTACCTAACAATCCGCCGTCGTCATCGCCGTCATCATCGCCGCCGTCGTCTTCGTCGTCGACGAGGACCATCGTGACGGCGGTGGCTATCACTGCAGTGGGTATGGCTCTGATTTCCACGGTGTTCTTCTTTTTAATCCAGAGATATCTGATCAGAAGAAAACGGAAAACAGAGGAGGTGGATTCGGGTCCGGGTCAGGGGCCGGTGTCGCAGCCGGCGGTTGCTCGGAATGAATTTGCGCGTGTTGATGGGAATCTTAAGGGGTTTATTGTGGATGAAGATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAGAAGGAAATCTAAGAATAGCTTTGATCGGGGTGATGGAGAAGGAAATGTTCAAGCAAATCGAAGCAAAAAGTCAGAGCCTGTTCAAGAGATTCCTTTACTTCGAGGAAAATCTTCGAGTTCTCATGTTAAAATTTCATCGGAAGATGAAGAACCCCGTCGGGTTACTCCTCCGCCACCTCCGCCACCGTCCCACATTAACAACCCTCCGCCATTTACTGGGAAGTCTGTTCAGGAAGTTGGAAAACCATCGAGCAGTTCAATTCTTTCATCATCTGCACCACCGCAACCAGCGGCAATTCCGGTACCTCCGTCACAATTTCTCATGGCTGTTCCTAACAATAAGAGCTCTGTTCCACCACCACCGCCGCCAATTCCAGCCAAGACGGTTTCAAGACCGCCACCGCCGCCTCCTCCCATTGCTACCAAGACCAATTCAAGACCGCCGCCACCGCCTCCCATTCCAGCCAAGACCAATTCAGCAGCCCCACCTCCCCCTCCAATAGTGGCCAAGGCAAATCCGGCAGCACCGCCGCCGCCCAAGGCCGGCAGTTCCAAATTGCCGTTACGGCCTGCACCTCAAAAAGAGGGTAAATCCTCTGGAGAATCTTCTACATCGGCCGACAATGGTCAGGTGAAAATGAAGCCTCTGCATTGGGATAAAGTGAACACCGCAAATGCCGATCACTCCATGGTTTGGGACAAAATGCAGGCCGGTTCTTTCAAATTTGATGGGGATCTCATGGAGGCTCTGTTTGGATACGTCGCAACCAACCGGAAGTCCCCCCGGAGTGAGGCTAATTCTTCAGCAATCCCCACTGGCCGGAACTCAGGGCCATCGCAGACTTTCATCCTTGAACCCAAAAAGTCACAGAACATAGCCATTGTAGTCAAGTCCTTGACCATTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGCCAAGGCCTCGAAACAGATATTCTTGAAAAACTCACGAGAATTACTCTGACACAAGAAGAAATTTCTCAAATTCTTGCTTACAAAGGAGACCCCCAAAAGCTTGCTGATGCCGAAACTTTCCTTTACCATCTTCTCAAATCGGTTCCATCTGCCTTTGCGCGGTTCAACGCCATGCTTTTCCGATTGACTTTCGGCTCTGATATTCATCATCTAAAGGAATCTCTAGAAATTCTGGAATCGGCCTGCAAGGAGCTTAGAACTCGAGGGCTGTTTCTGAAACTGCTTGAAGCAGTTCTCAAAGCTGGGAATCGGCTGAATGCGGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTTTCAGCTCTCCGGAAGCTCTCGGATGTTAGGAGCACTGACGGGAAAACCACTTTGCTTCACTTCGTGGTGCAAGAAGTCATCAGAGCAGAAGGGAAAAGGTGTGTTTTAAACAGGAACAAGAGCTTGAGCCGTAACACCAGCCATGCCAGCGACAGCAGCGTTAGTACTTCCGATAATTCATCTTCGAAAGAGGACAGAGTAAATGAATACATGATGTTGGGGTTGCCAGTGGTGGGAGGTCTGAGCGCTGAGTTCTCTAATGTAAAGAAGGCAGCAACGATCGACTATGAGAGCTTCGCCAACACTGGAACGTCTTTGACCAGCCGAACTGCAGAAATCCGGCAGCTCATGGCTCAAATTGGGAACAATGGAGGTGGGTTTGGGAAAGAAATGAGAGGGTTTCTTGAGGCAGCAGAGAGTGAGCTGAAGGTGGTGAGAGAAGAACAGACGAAGGTGATGGAGCTAGTGATGAAGACAACAGAGTATTATCAAGCTGGAAGTTCAAGAGATAAGGAATCAAATCGTCTTCAATTCTTCATCATAGTTAAGGATTTTCTAGAAATGGTAGATCGGGTGTGTGTGGAAATTGCCAAAAATCTCCAGAAAAGAAGATCGTCGACAGTAAATGTGGGTTCATCGCCGGTGAGATCGAAGGCCATCTTCCCTAACCTGCCGGCAAATTTTATGTCAGACAAGTCAAGAGGGAGTTCTAGTGATTCAGATAATGAATTCTGA 2502 48.8 MAMLLHLHLRRQLWPLHLLLLFLSVSPVSYCQDTPPQNIETFYPILPPPPFLPNNPPSSSPSSSPPSSSSSTRTIVTAVAITAVGMALISTVFFFLIQRYLIRRKRKTEEVDSGPGQGPVSQPAVARNEFARVDGNLKGFIVDEDGLDVIYWKRLERRKSKNSFDRGDGEGNVQANRSKKSEPVQEIPLLRGKSSSSHVKISSEDEEPRRVTPPPPPPPSHINNPPPFTGKSVQEVGKPSSSSILSSSAPPQPAAIPVPPSQFLMAVPNNKSSVPPPPPPIPAKTVSRPPPPPPPIATKTNSRPPPPPPIPAKTNSAAPPPPPIVAKANPAAPPPPKAGSSKLPLRPAPQKEGKSSGESSTSADNGQVKMKPLHWDKVNTANADHSMVWDKMQAGSFKFDGDLMEALFGYVATNRKSPRSEANSSAIPTGRNSGPSQTFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETDILEKLTRITLTQEEISQILAYKGDPQKLADAETFLYHLLKSVPSAFARFNAMLFRLTFGSDIHHLKESLEILESACKELRTRGLFLKLLEAVLKAGNRLNAGTARGNARAFNLSALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKRCVLNRNKSLSRNTSHASDSSVSTSDNSSSKEDRVNEYMMLGLPVVGGLSAEFSNVKKAATIDYESFANTGTSLTSRTAEIRQLMAQIGNNGGGFGKEMRGFLEAAESELKVVREEQTKVMELVMKTTEYYQAGSSRDKESNRLQFFIIVKDFLEMVDRVCVEIAKNLQKRRSSTVNVGSSPVRSKAIFPNLPANFMSDKSRGSSSDSDNEF 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1527777 1530678 + Cp4.1LG01g03990.1 Cpe01g00268 461581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00268 833 MobiDBLite consensus disorder prediction 226 250 - -
Cpe01g00268 833 ProSiteProfiles Formin homology-2 (FH2) domain profile. 360 804 IPR015425 -
Cpe01g00268 833 Pfam Formin Homology 2 Domain 363 779 IPR015425 -
Cpe01g00268 833 SUPERFAMILY Formin homology 2 domain (FH2 domain) 290 793 - -
Cpe01g00268 833 PANTHER FORMIN-LIKE PROTEIN 4 15 311 - -
Cpe01g00268 833 PANTHER FORMIN-LIKE PROTEIN 4 304 829 - -
Cpe01g00268 833 SMART it6_source 360 793 IPR015425 -
Cpe01g00268 833 MobiDBLite consensus disorder prediction 271 342 - -
Cpe01g00268 833 Coils Coil 724 744 - -
Cpe01g00268 833 PANTHER FORMIN-RELATED 304 829 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe01g00268 833 PANTHER FORMIN-RELATED 15 311 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe01g00268 833 MobiDBLite consensus disorder prediction 161 368 - -
Cpe01g00268 833 Coils Coil 538 558 - -
Cpe01g00268 833 MobiDBLite consensus disorder prediction 417 436 - -
Cpe01g00268 833 MobiDBLite consensus disorder prediction 631 653 - -
Cpe01g00268 833 Gene3D Formin, FH2 domain 360 790 IPR042201 -
Cpe01g00268 833 MobiDBLite consensus disorder prediction 353 367 - -
Cpe01g00268 833 MobiDBLite consensus disorder prediction 631 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00268 Cpe-Chr1:1527777 Cpe18g00055 Cpe-Chr18:1095180 1.65E-103 dispersed
Cpe11g00750 Cpe-Chr11:5986966 Cpe01g00268 Cpe-Chr1:1527777 6.85E-07 dispersed
Cpe01g00268 Cpe-Chr1:1527777 Cpe01g01416 Cpe-Chr1:8508238 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00268 - - mcha:111019114 1067.37