Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00277 ATGAGTGGATGGGATAGGGTTGGATCGTCGAGTTCGAGATTGGGCCGTGGCAATTCTGCCATGCCTGAGAGGACCTCCTCTTCTAACACGGTTCGACTCGGCCGAGTCCAGCCACAGGCGCCTGGATATCGCACCATCTTCTGTAATGATCGCGACGCTAATCTCCTTATCAAATTCAAGGGGAATTCAGTTTCGACCACAAAGTACAACTTCTTCACGTTCTTTCCGAAAGGATTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACAATCTCAATCTTATCCACCACACCCATCAGTCCTGTGCATCCAATCACAAATGTGGTCCCTTTAAGTCTGGTTCTACTTGTTTCTCTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTCCTGCAAGATCAAAAGTGGGAGAGCGTTCCTTGGAAAAAGTTGCAGGTTGGGGACATTGTTAGGATTCGGCAAGATGGATTCTTTCCTGCAGATCTTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGATGGGGAGACAAATTTGAAGATTAGAAAGGCCCTGGAAAAGACATGGGATTACTTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACTGGCAATGTTATTATTCAGAAGCAAACATTACCTCTCAGCCCAAACCAACTTTTGTTGCGAGGATGCAGTCTCAGGAACACGGAATATATTGTTGGGGCTGTTATTTTTACAGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACACTGGAGAAAAAACTTGACAAACTTATTCTTACGCTTTTTGCTACTCTCTTTATCATGTGTTTGATTGGAGCAATTGGCAGTGGCGTGTTTGTAAACGAAAAGTACTACTACTTAGCTCTTGATAAGGGAGGGGAAAACCAATTTAACCCTAGCAACCGATTCCTGGTTGTCATTCTGACCATGTTTACCCTTATTACTCTGTATTCAACCATCATTCCTATTTCTCTTTATGTTTCCATTGAGATGATAAAATTTATTCAATCGACACAATATATCAATAAGGATCTAAATATGTTCCATGCTGATAGCAATACCCCTGCATTGGCTAGAACTTCCAATCTGAATGAAGAACTGGGGCAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGTTCAATCGGTGGAGAGATATATGGAACTGGTGTCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGAGCACAAATCAGCCAATGCTGTACAGGAAAAGGGATTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCATGGAGAAATGAACCCAACTCTGATCTCTGTAAGGAATTTTTCAGATGCCTTGCTATTTGCCATACTGTACTCCCTGAGGGCGATGAATCCCCTGAAAAGATCACATATCAAGCAGCATCACCTGATGAGGCTGCGTTGGTAACTGCGGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACACCTACTACAATATATGTTCGTGAATCTCATGTTGAAAAGATGGGTAAAATTCTAGATGTTTCTTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTGGTGTGTCGTTATTCTGATGGTAGGCTTGTCTTGTACTGCAAGGGTGCTGATACCGTTATATATGAGAGATTGGCTGGTGGAAATGATGATCTGAAGAATATAACGAGGGAACACTTGGAGAAATTTGGATCGTCCGGTTTGAGAACTCTATGTCTTGCTTATAGAGACTTGCTTCCCGACATGTATGAAACCTGGAATGAGAAATTCATTCAAGCTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGACACTTTCTAGAGCCGGTATCAAGATTTGGATGCTAACGGGAGACAAGATGGAAACTGCTATAAATATAGCTTATGCTTGCAATTTAATAAACAATGAAATGAAACAATTTATTATCAGTTCAGAAACAGATGCAATCAGAGAAGTTGAAAACAGGGGTGACCAAGTGGAGCTTGCACGTTTTACTAGAGAAGAAGTAAAAAAGGAATTGAAGAAATGTCTTGAGGAAGCGCAGCAGTGTTTACAATCTATGTCTCCACCAAAATTAGCACTTGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACGTTACTAAATTTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCAAAGAAAATAACACTTAGTATTGGTGATGGTGCTAATGATGTTAGTATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAGGGAATGCAAGCTGTGATGGCTAGTGATTTTGCTATTGCCCAGTTTCGCTTTCTCACAGATTTACTTCTTGTACATGGACGATGGTCATATCTTAGAATCTGCAAGGTTGTCACATACTTCTTTTACAAGAATCTTACGTTCACTTTAACTCAGTTTTGGTTCACCTTCCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCATTGTATAATGTCATATTTACGGCCCTTCCTGTAATAATGGTCGGACTATTTGACAAGGATGTTAGTGCGGCCCTATCTAAAAAGTACCCCGAGCTCTACAGAGAGGGAATAAGAAATGTGTTTTTCAAGTGGAGAGTTGTAACAACTTGGGCCATCTTTTCCGTCTACCAATCTTTAGTCTTTTATTATTTTGTAACCGCTTCCAGTTCCAGCAGTCAATCGGCATCTGGCAAGGTGTTTGGTCTATGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGGCTGCTTATGATCTGCAATTCAATTACTAGGTGGCATTACATAACGGTTGGGGGAAGCATTTTAGCATGGTTCATGTTTATTTTGCTATATTCTGGTCTTATGACACCACATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGCACACTCTATTTTTACGTAGCTGTCCTCCTTGTCCCTGTCGTTGCGCTTCTTTGTGATTTTGCTTACCAAGGCATTCAGAGATGGTTTTTCCCCTATGATTATCAGATAGTTCAAGAAATTCATAGGCATGAACCTGATGGTAGAAGTGCGGTAGGATTGTTGGAGGTTCAGAACCATCTTACACCGGAAGAGGCAAGAAGCTATGCCATGTCTCAACTCCCGCGGGAGTTATCGAAGCACACTGGCTTTGCTTTCGATTCACCTGGCTATGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAGGCATGGGATGTTGCCAGGAGAGCCAGTGTGAAGTCAAGACTAAAGATTAGGGAAAAGAAATGA 3591 41.07 MSGWDRVGSSSSRLGRGNSAMPERTSSSNTVRLGRVQPQAPGYRTIFCNDRDANLLIKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKKLQVGDIVRIRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFIMCLIGAIGSGVFVNEKYYYLALDKGGENQFNPSNRFLVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGVTEIERGIAEQNGLKVEEEHKSANAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKILDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVIYERLAGGNDDLKNITREHLEKFGSSGLRTLCLAYRDLLPDMYETWNEKFIQAKSSLRDREKKLDETLSRAGIKIWMLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFTREEVKKELKKCLEEAQQCLQSMSPPKLALVIDGKCLMYALDPSLRVTLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAKKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIMVGLFDKDVSAALSKKYPELYREGIRNVFFKWRVVTTWAIFSVYQSLVFYYFVTASSSSSQSASGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFMFILLYSGLMTPHDRQENVYFVIYVLMSTLYFYVAVLLVPVVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPDGRSAVGLLEVQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRLKIREKK 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1568832 1581764 - Cp4.1LG01g03940.1 Cpe01g00277 461590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00277 1196 Gene3D - 660 864 IPR023214 -
Cpe01g00277 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 852 1102 IPR032630 -
Cpe01g00277 1196 SFLD Haloacid Dehalogenase 404 875 - -
Cpe01g00277 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 676 - -
Cpe01g00277 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1102 IPR023298 -
Cpe01g00277 1196 Pfam E1-E2 ATPase 142 375 - -
Cpe01g00277 1196 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Cpe01g00277 1196 PRINTS P-type cation-transporting ATPase superfamily signature 824 843 - -
Cpe01g00277 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 676 1192 - -
Cpe01g00277 1196 Gene3D - 124 289 - -
Cpe01g00277 1196 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Cpe01g00277 1196 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Cpe01g00277 1196 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 25 676 - -
Cpe01g00277 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 706 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g00277 1196 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 797 903 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g00277 1196 Pfam Cation transport ATPase (P-type) 520 614 - -
Cpe01g00277 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 676 1110 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g00277 1196 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 676 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g00277 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 676 1192 - -
Cpe01g00277 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Cpe01g00277 1196 SUPERFAMILY HAD-like 410 867 IPR036412 -
Cpe01g00277 1196 SFLD p-type atpase 404 875 IPR044492 -
Cpe01g00277 1196 Coils Coil 739 759 - -
Cpe01g00277 1196 CDD P-type_ATPase_APLT_Dnf-like 61 984 - -
Cpe01g00277 1196 MobiDBLite consensus disorder prediction 1 34 - -
Cpe01g00277 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 650 IPR023299 GO:0000166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00277 Cpe-Chr1:1568832 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g01426 Cpe-Chr1:8567392 Cpe01g00277 Cpe-Chr1:1568832 1.86E-47 transposed
Cpe01g00277 Cpe-Chr1:1568832 Cpe01g01425 Cpe-Chr1:8552645 3.05E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00277 K14802 - csv:101207069 2211.8