Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00281 ATGAGTTTTCCAGAGAGCTTCAATTCATTTCCATTTACTGGTACTAGGGTTAGGGGGAGGATGAAAAGGGGGAAATTGGATACAATGGTATCACGAAACCGAATTAGGTTGCTTCAATTTCTTATGGGGTTGGTGTTTTTCTATCTGCTTTTCATGAGTTTTGAAATACCGCTGGTGTATCGAACCGGATATGGGTCGGTGCCTGATGATGGAACATTTGGATTCACCAGCGACACTTTGCCGAGGCCTTTTCTGCTTGAAAGTGAAGAGGAAATGGCTGATAAAGACGCCCCTCGTCGACCCTCTGATGATACCTTTCTGGTTTCTCATGGCTCGCCGCATCGGACACCCGAGAGGCGAATGCGTGAGTTCAAGAAAGTTTCGGGTTTAGTCTTCGACGAAAGCACATTTGATCGTAATGCTAGTAAGGGGGAGTTCTCGGAGCTTCATAAAGCGGTTAAACATGCTTGGGTAGTGGGGAAAAAGCTTTGGGGGGACTTAGAGTCCGGCAAAATTGTTCTCCAACCCAAAACGAAGACAGAGAATCAGTCGGAGTCTTGTCCACATTCGATTACGCTTTCTGGATCCGAATTTGAGGCACAGAGTCGGATTCTGGAGCTCCCCTGCGGCTTGACGCTCTGGTCGCATATCACTGTGGTGGGGACGCCTCGTTGGGCTCACTTGGAAGATGATCCCAAGATTTCAATCTTGAGGGAAGGGGATGATTCAGTGATGGTTTCACAGTTTATGATGGAGTTGCAAGGGCTGAAGACGGTGGATGGTGAAGACCCACCAAGAATTCTTCATTTCAATCCAAGGTTGAAGGGAGATTGGAGTGGCAAGCCTGTTATCGAACAGAACACTTGCTATAGGATGCAATGGGGCACAGCGCTGAGATGTGAGGGATGGAAAGCCAGGGCGGATGAAGAAACAGTCGACGGGCAGGTAAAATGTGAGAAATGGATTCGTGACGACGACAGCCATTCCGAAGAATCGAAGGTAATATGGTGGTTAAATAGACTAATAGGACGCACGAAAAAGGTGGCAATCGATTGGCCATATCCTTTCGCGGAGGGCAGGCTATTTGTTCTAACTGTGAGTGCTGGGTTGGAAGGTTACCATATCAATGTTGATGGAAGGCATGTCACTTCTTTTCCATATCGCACTGGGTTTGTTCTGGAGGATGCCACTGGGTTGTCTGTAAATGGCGATATTGACGTGCACTCCATATTTGCTGCTTCCTTACCTGCTACACATCCTAGCTTTGCACCACAGAAGCATATTGAGATGTTGACACAATGGAAAGCCCCTTCACTTCCCAAGAAAAACGTGGAGCTTTTCATTGGCGTTCTTTCTGCTGGCAATCATTTTGCGGAGCGAATGGCTGTTAGGAAGTCTTGGATGCAACATAGATTAATCAGATCTTCACTAGTTGTTGCTAGGTTCTTCGTGGCAATGCACGGAAGAAGGGAAGTTAATATCGAGTTGAAGAAAGAGGCCGAGTATTTTGGAGATATTGTCATAGTTCCTTACATGGATAACTATGATCTCGTTGTACTGAAGACGATTGCAATCTGTGAATATGGGGTTCACACGGTGGCTGCAAACTATATCATGAAGTGTGACGACGATACATTTGTTAGAGTGGATGCAGTGATTGATGAAGCTCACAAAGTCCAATCTGATGGTGGGAGCCTTTATGTTGGAAACATGAACTTTCACCATAAACCTCTTCGACATGGAAAATGGGCAGTGACTTACGAGGAATGGCCAGAAGAAGATTACCCAACGTACGCAAATGGGCCGGGTTACATTCTGTCATCGGACATTGCAGAGTATATCGTATCTGAGTTTGAGAAGCACAGATTAAGGTTGTTCAAGATGGAAGATGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGTACGAAACCAGTTGTATATCATCACAGTCTAAGGTTTTGCCAGTTCGGGTGCATTGAGGATTACTTAACTTCTCATTACCAGTCTCCTAGACAGATGCTTGTGGGTTCCTGGACTAGTCCATTCGTGATGAGGCCAAGAATCGCCCTCAACATCAAATCCGTAGACTACGAGTTCGTTCAAGAAACATTCGGATCCAAAAGCCAGCTTCTTCTCCAATCCAACCCTGTTCACAAGAAGATCCCCGTTCTCATTCACGCCGGCAAACCCATCGCCGAATCCTCCATCATCGTTGAGTATATCGATGAAGTCTGGTCCTCTGCTCCTTCCATCCTTCCCTCCGATCCTTACGATCGCGCCCTCGCTCGATTCTGGGCTTCCGTCGTTGACGAAAAGTTTTTCACACCAATGAAAGCGAGTGTGGGTGCAGAAGGGGAGGTGAAGAAGGGGCTTATGAATCAAGCGGTGGAAGCCATAGGGTTATTGGAGGAAGCTTTCGGGACGCTGAGCAGAGGAAAGGCGTTCTTCGGCGGAGACCATATTGGGTTTGTTGATATCGCTTTCGGGTCGTTTCTGGGGTGGATTAGAGTGGCGGAGACATCAAATGGGATGAAATTGATAGACGCAGCGAAGACGCCAGGGCTGGACGGATGGGCTCAGAGATTCTCTGCACACGACGCTGTGAAAGATCTGTTGCCCGACACTGCAAAGCTTCTGGAGTTCTCCAAGGTTCTGGCAGCCAAACTTAAAGAAAAGCATTGA 2685 47.26 MSFPESFNSFPFTGTRVRGRMKRGKLDTMVSRNRIRLLQFLMGLVFFYLLFMSFEIPLVYRTGYGSVPDDGTFGFTSDTLPRPFLLESEEEMADKDAPRRPSDDTFLVSHGSPHRTPERRMREFKKVSGLVFDESTFDRNASKGEFSELHKAVKHAWVVGKKLWGDLESGKIVLQPKTKTENQSESCPHSITLSGSEFEAQSRILELPCGLTLWSHITVVGTPRWAHLEDDPKISILREGDDSVMVSQFMMELQGLKTVDGEDPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGTALRCEGWKARADEETVDGQVKCEKWIRDDDSHSEESKVIWWLNRLIGRTKKVAIDWPYPFAEGRLFVLTVSAGLEGYHINVDGRHVTSFPYRTGFVLEDATGLSVNGDIDVHSIFAASLPATHPSFAPQKHIEMLTQWKAPSLPKKNVELFIGVLSAGNHFAERMAVRKSWMQHRLIRSSLVVARFFVAMHGRREVNIELKKEAEYFGDIVIVPYMDNYDLVVLKTIAICEYGVHTVAANYIMKCDDDTFVRVDAVIDEAHKVQSDGGSLYVGNMNFHHKPLRHGKWAVTYEEWPEEDYPTYANGPGYILSSDIAEYIVSEFEKHRLRLFKMEDVSMGMWVEQFNSTKPVVYHHSLRFCQFGCIEDYLTSHYQSPRQMLVGSWTSPFVMRPRIALNIKSVDYEFVQETFGSKSQLLLQSNPVHKKIPVLIHAGKPIAESSIIVEYIDEVWSSAPSILPSDPYDRALARFWASVVDEKFFTPMKASVGAEGEVKKGLMNQAVEAIGLLEEAFGTLSRGKAFFGGDHIGFVDIAFGSFLGWIRVAETSNGMKLIDAAKTPGLDGWAQRFSAHDAVKDLLPDTAKLLEFSKVLAAKLKEKH 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1597633 1603124 + Cp4.1LG01g03760.1 Cpe01g00281 461594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00281 894 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 27 682 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cpe01g00281 894 SMART Gal_bind_lectin_2 207 412 IPR001079 GO:0030246
Cpe01g00281 894 Pfam Glutathione S-transferase, C-terminal domain 788 866 IPR004046 -
Cpe01g00281 894 MobiDBLite consensus disorder prediction 91 119 - -
Cpe01g00281 894 SFLD Glutathione Transferase (cytosolic) 674 892 IPR040079 -
Cpe01g00281 894 SFLD Main.3: Omega- and Tau-like 674 892 IPR045073 -
Cpe01g00281 894 CDD GST_C_Tau 757 886 IPR045074 GO:0004364|GO:0006749
Cpe01g00281 894 CDD GLECT 205 411 IPR001079 GO:0030246
Cpe01g00281 894 Gene3D Glutaredoxin 675 752 - -
Cpe01g00281 894 SUPERFAMILY Concanavalin A-like lectins/glucanases 205 411 IPR013320 -
Cpe01g00281 894 Pfam Galactosyltransferase 459 640 IPR002659 GO:0006486|GO:0016020|GO:0016758
Cpe01g00281 894 Gene3D - 437 674 - -
Cpe01g00281 894 Gene3D - 202 411 - -
Cpe01g00281 894 Gene3D - 753 893 - -
Cpe01g00281 894 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT4 27 682 - -
Cpe01g00281 894 Pfam Galactoside-binding lectin 203 411 IPR001079 GO:0030246
Cpe01g00281 894 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 671 750 IPR004045 -
Cpe01g00281 894 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 203 413 IPR001079 GO:0030246
Cpe01g00281 894 SUPERFAMILY Thioredoxin-like 675 775 IPR036249 -
Cpe01g00281 894 CDD GST_N_Tau 674 746 - -
Cpe01g00281 894 Pfam Glutathione S-transferase, N-terminal domain 675 744 IPR004045 -
Cpe01g00281 894 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 756 886 IPR010987 -
Cpe01g00281 894 SUPERFAMILY GST C-terminal domain-like 744 888 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00281 Cpe-Chr1:1597633 Cpe09g01056 Cpe-Chr9:9212822 0 dispersed
Cpe08g00369 Cpe-Chr8:2306686 Cpe01g00281 Cpe-Chr1:1597633 9.81E-51 dispersed
Cpe01g00281 Cpe-Chr1:1597633 Cpe01g01428 Cpe-Chr1:8576602 1.34E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00281 K20843 - csv:101206587 1237.25