Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00311 ATGACCCAGATCCTCAATCTTGTTCTTGGAGTGGTTGCCATTGCAGTTGCGGCCATTATCATCTTCATCTTCTTGAAAAGAAGGGGAAAAGGGAAGGATGAATACAACGACACAGAGAGGAACCAGGAGAGGGAAAATGGGGAAGAACAGAGAGAAGAATTGGTGAGTTTTCATGGCGGAGAGGATCTTACCATTGTTGATATATTGGAAGCTCCAGGGGAAGTGATTGGAAAAGCCAGCCATGGAACTCTGTATAAGGCCTACCTGCAAGGGAGCAGCACTGTGAGGCTGCTGAGGTTCCTGAGGCCACTTTGTACTGCTGGGTTTGAGGCTTTTGTTGCTCAGATTGAGTTCTTGGGTGACATTAGGCACCAAAATTTGGTGCCTCTTTTGGGATTCTATTCAGGTCCAAGAACAGAGAAGCTCCTGATTCATCCATTTTACAGGCATGGGAATCTGGCTCAGTTCATTAGAGCGAAAGGATTGGATCATCTCCACACTGGTTTGCAAAAGCCAACAATCCATGGGAATCTACAGGCAAAGAATGTTCTTTTGGATCGAAACTACGAACCGTTCGTGTCGGATTTCGGCCTACATTTGCTGTTGAATTCATCTTCTGCACAAGAGTTGGTTGAAGCTTCAGCAGGCAATGGCTACAAAGCTCCTGAGTTGATCAAGATGAAGGATGCAAATGAGAAGAGCGATATCTATAGCTACGGCGTAATCTTATTTGAGTTGCTGTCCGGGAAGGAACCGATCGACAAAAAGGCGAGTCCTGGCGAGGATTGTTACTTGCCTAACTTCATGAGAAATGCTGTTCTTGAGCATAGAATTGGAGAGCTTTTCCATCCAGAAATACTTGTATTTAGCAGCGTTGATGGAAACAGTGTCACTGAAGAAAAGATACTCAAATTCTTTCAGATTGCTATGGCTTGCTGTTCTCCTTCTCCAGCTCTTAGGCCAAGTATGAAGCAAGTGCTTCAGAAACTCAACGAAATCAGCACATAA 1008 44.74 MTQILNLVLGVVAIAVAAIIIFIFLKRRGKGKDEYNDTERNQERENGEEQREELVSFHGGEDLTIVDILEAPGEVIGKASHGTLYKAYLQGSSTVRLLRFLRPLCTAGFEAFVAQIEFLGDIRHQNLVPLLGFYSGPRTEKLLIHPFYRHGNLAQFIRAKGLDHLHTGLQKPTIHGNLQAKNVLLDRNYEPFVSDFGLHLLLNSSSAQELVEASAGNGYKAPELIKMKDANEKSDIYSYGVILFELLSGKEPIDKKASPGEDCYLPNFMRNAVLEHRIGELFHPEILVFSSVDGNSVTEEKILKFFQIAMACCSPSPALRPSMKQVLQKLNEIST 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1762136 1763815 - Cp4.1LG01g03580.1 Cpe01g00311 461624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00311 335 Pfam Protein tyrosine and serine/threonine kinase 74 330 IPR001245 GO:0004672|GO:0006468
Cpe01g00311 335 ProSiteProfiles Protein kinase domain profile. 70 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g00311 335 Gene3D Transferase(Phosphotransferase) domain 1 149 335 - -
Cpe01g00311 335 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 334 - -
Cpe01g00311 335 Gene3D Phosphorylase Kinase; domain 1 40 147 - -
Cpe01g00311 335 SUPERFAMILY Protein kinase-like (PK-like) 73 331 IPR011009 -
Cpe01g00311 335 Coils Coil 32 52 - -
Cpe01g00311 335 MobiDBLite consensus disorder prediction 32 51 - -
Cpe01g00311 335 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00311 Cpe-Chr1:1762136 Cpe13g00094 Cpe-Chr13:680553 7.51E-94 dispersed
Cpe01g00311 Cpe-Chr1:1762136 Cpe14g00178 Cpe-Chr14:998526 0 wgd
Cpe01g00311 Cpe-Chr1:1762136 Cpe05g00740 Cpe-Chr5:4535420 3.02E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62107 PF07714 PK_Tyr_Ser-Thr 6.90E-23 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00311 - - csv:101206706 517.694