Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g00352 ATGGCGGAGGGTGAATTGGAGAGGGGCGAGACCAATTGTGGCCTTGCTTCAATGGATTCCATCGAATCGCGATGGGTATTTCAGGATGAGGATCAATCGGAGATCGACGACGACGAGGATGAGGAAGACGACGACGAGGATGCAGAGCGGAATCGTCTGGATTTGGAATCTGAGGAAGAAGATAATGTTGAGCAGAAATTGATTCGCACTGGTCCGCGGATTGATTCATTCGATGTCGAAGCCCTTGAGGTCCCTGGTGCGCAGAGAAATGACTACGAGGACTTCAGCGTGGGGAAGAAAATCGGTCTTGCTTTCCAGACCCTTGGGGTTGTATTCGGTGATGTTGGGACAAGCCCTCTATATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGATGAAGATGTTATTGGGGCATTATCTCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTACTCGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTTCTCCCAAATCAACTTCCTTCAGATACCCGAATATCAAGTTTTAGGTTAAAGGTGCCATCGGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCTTGACTTTAAAGAAGCTTATTTTGATTCTCGTTCTTGCTGGAACTTCTATGGTAATAGCTGATGGAGTTGTTACACCAGCAATGTCGGTAATGTCAGCTGTTGGTGGACTAAAGATTGCAGTGGAGGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTTTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTCATATGGTTTTGTACTCTTGCAGGCCTTGGGATTTATAACCTTGTCATATATGACCGCAGTGTCTTGAAGGCATTCAATCCCGTTCACATATATTATTTCTTCAAAAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTATTTTATGTGCTACCGGTTCCGAGGCGATGTTTGCAGATCTTTGCTATTTCCCTGTGCGGTCAATACAGCTTACATTTGTCTTCCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTGATATCAAACCACAATGGAGCTGAGCATGTTTTTTATAATTCCGTTCCCAAAAGTGCCTTCTGGCCAGTTTTTCTCATCGCTAATGTTGCTGCATTAATTGCCAGTAGAGCAATGACTACGGCTACCTTTTCGTGTATAAAACAATCGACAGCACTTGGATGTTTTCCTCGTCTTAAGATCATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTCATCTGCTCCATATCTAGCATGTATGAGATTGGAAACGCATATGGTATCGCTGAGCTGGGAGTGATGATGATGACAACTATCTTGTTAACCATTGTAATGCTTCTTATATGGCAGATAAATATTATCATCGTGATGGGTTTTGCGATGATCTTTCTTGGGATAGAACTGATATTTTTCTCGTCTGTCTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTATATCTGGAACTACGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAACAAAAACTGTCAATGGATTTAATGCGGGAACTCGGATGCAATCTCGGGACAATCAGAGCTCCTGGCATCGGTTTGGTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCTGTTCATTCAATGATCATATTTGTCTGTATCAAGTATGTACCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATTTTTCGCTGCATTGCCAGGTATGGTTACAAGGATGTCCGAAAAGAAAATCATCAGGTATTTGAGCAGCTCTTAATTGAAAGCCTTGAGAAATTCATCCGTCGAGAAGCACAAGAAAGATCATTAGAGAGTGATGGAGATGACGATACTGATTCCGACGAGATTCATAGGTCGCAACTTCTCATAGCTCCCAATGGAAGTGTCTATTCACTTGGCATTCCTCTCCTCGCTGAATTCAACGAGACTAGACCCATAACTGAAATCATCAACGTACCAGAAGAGGTGCAGCCAATTGAATCTCTAGACCCCTCAATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCCTTTATAAGAAAGGCTAAAGAATCAGGTGTAGTGTACCTTCTCGGTCATGGAGACATTAGAGCAAGAAAGGATTCTTGGTTTATCAAGAAGCTAATGATCAATTACTTCTATGCGTTTTTAAGAAAGAACAGCAGGAGGGGCATTGCCAACTTGAGTGTTCCCCACACCCACCTGATGCAGGTTGGCATGACATATATGGTTTAG 2550 42.78 MAEGELERGETNCGLASMDSIESRWVFQDEDQSEIDDDEDEEDDDEDAERNRLDLESEEEDNVEQKLIRTGPRIDSFDVEALEVPGAQRNDYEDFSVGKKIGLAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLILILVLAGTSMVIADGVVTPAMSVMSAVGGLKIAVEAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGLGIYNLVIYDRSVLKAFNPVHIYYFFKRNSTNAWYCLGGCILCATGSEAMFADLCYFPVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHNGAEHVFYNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVICSISSMYEIGNAYGIAELGVMMMTTILLTIVMLLIWQINIIIVMGFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLVYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQVFEQLLIESLEKFIRREAQERSLESDGDDDTDSDEIHRSQLLIAPNGSVYSLGIPLLAEFNETRPITEIINVPEEVQPIESLDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2025893 2033495 - Cp4.1LG01g03040.1 Cpe01g00352 461665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g00352 849 MobiDBLite consensus disorder prediction 1 64 - -
Cpe01g00352 849 MobiDBLite consensus disorder prediction 31 54 - -
Cpe01g00352 849 PANTHER POTASSIUM TRANSPORTER 7 23 848 - -
Cpe01g00352 849 Pfam K+ potassium transporter 104 677 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00352 849 TIGRFAM kup: potassium uptake protein 103 849 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g00352 849 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 848 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00352 Cpe-Chr1:2025893 Cpe03g00669 Cpe-Chr3:4007424 0 dispersed
Cpe01g01699 Cpe-Chr1:11110065 Cpe01g00352 Cpe-Chr1:2025893 0 transposed
Cpe01g00352 Cpe-Chr1:2025893 Cpe14g00213 Cpe-Chr14:1199654 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g00352 - - csv:101214942 1519.98